SimpleSearch - Line and FST details


Line specific information

 
Line ID 090H08
Vector Used pAC161
Line Availability line died - no seeds available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 4919, 4936, 10147, 91042, 91050

Gene hit F4L23

 
Sequence (A. th genome BLAST matches underlined) 
>10-K012670-022-90-H08-8409
CTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGAAGTC
AATTGAAAATTATCACGTTCTTAAATTGGTCCGACCGATCCAATCCCAAGTTCGATCTTA
TGATAAGGTTTTGTTGAGATAAATGAGTAGGAAAGTCTATCATCTCAAAACGTCTTTAAA
ATATTACAATATATAAAAATGTATCAAAACATATATTAATAAATCATGGAATCAGACCAA
TTATCTACTCATTACTAATTTTGTTCACAAACTCCAAATTCTCTAAGTAGTCACGGTATT
AAGTAGGTTCGGATTGGATTATTATAAGAAACTATGGGATCCTCCCTATAGTGAGTCGTA
TTACTTCAATACATTTTTTACTATTATAATAAATAAATACTAAACACATGTACGACCGCT
TGGTCGAGACTACAAAGACAGTTTTTATGCGAGCTAAATATAAAACATCACAGATTGTTG
TGGTCATTATTGGGCGGTCCTCAATAGCATGCCCAAGAATATTTTTTCTTTTAAAAAAAA
AAATCTCTTCCCCAATAAGGCAAAAATTTTCCTTTT
GenBank Accession FR802740 [GenBank]
Graphic View Graphic view of sequence FR802740 of line 090H08
Predicted Position of Insertion Chr2:18648395 - go to primer design
BLAST e Value 7e-129
Hit Clone Code (BAC ID) F4L23
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At1g59670

 
Sequence (A. th genome BLAST matches underlined) 
>03-K028184-022-090-H08t-8409
CAACCGAATTTGAGACCACCAGCGATCTTTGCTCTTATCACGACCGGACTGTATGGGATC
CTCCCTATAGTGAGTCGTATTACTCACCCCTTTTTACNCCTTCCCTTTCGAAGAGCGCTT
CGGACATCGTCCGTCGGATGGCGGGGGGGGGGGGGCNNTCGNNCCNTNNGATCNNCCCAC
NCNCCCGNNNAGCCCGNNANNCGATCGNNNTGGATTTGAANGCAGGTA
GenBank Accession FR802741 [GenBank]
Graphic View Graphic view of gene At1g59670
Predicted Position of Insertion Chr1:21930175 - go to primer design
BLAST e Value 3e-10
Hit Clone Code (BAC ID) T30E16
Hit Gene Code At1g59670 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glutathione S-transferase TAU 15
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37