SimpleSearch - Line and FST details
Line specific information
| Line ID | 100F02 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2050 |
| Note |
Gene hit At4g20980
| Sequence (A. th genome BLAST matches underlined) | >14-012119-strizhov-F2-35St TGACGTAAGGGATGACGCACAATCCACTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACACGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTC CGTTTAAACTATCAAGGCAAGGTCATCCACACGTAAGTCGAATAACTCATACTATAAGAA GGGCTTAGACGAAACTCATGACCTTGATGGGAACCTCCCTCTAGTGTGGAGCATTTATGA CAGAGTCAGCCTGTGTATACTCGAGATGATTCACATGCGGCCGTTAAACGGCGTTCGTGA TGGGTGGTGGCACGGGAGTCATTGCACAGACGATCACGACGAGCTCGCTCCTTCTGAGCA TCACGCTTATTAACTTCAACTTATTCATCTGGCCGTTGAGGACGCTGATTCCGATCGTGG TGAGGATTGAAACGCCATTTAGGTCCCACTTTGGGACGCGGCGGAGGGTTACCGTCGACC ACACCGAAAGCTGTGTTCTTAGCTCGGGATTACCCCCCGGGGGAAGCTACACCGAAAGCC TTGCCGCTTTGGCAATTTCGCAGAATCCCAACACTGCCGACGGGTCTGGGATCTCATCCT AAAAGGAGTCGGATAACCTCAACCCCCCTACCCCGCCCCCTGCTCCCCACACCCATCATT CCTCACACTCCCCCCATCAATAACCCATAACTTTAATTCAGTCCACCCCGTTACCTGGAC GCATTACAATCCACATCCCTAACAACAACATCAGCGATTCAACCCACCAACCCTCACCAC CCCCCAACATTACTACACGCTCCCCCCCCTAACGAACATCTTTTTCGCCCGTCACCACGT CAACCAACAAACACCTTCATTCCCTCCAACACCAGACTTTACTAAGTTGTCTGTTATGTA ATGAGTTGTGAATTATTAGATCAAATGC |
| GenBank Accession | FR802953 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:11217656 - go to primer design |
| BLAST e Value | 5e-53 |
| Hit Clone Code (BAC ID) | T13K14 |
| Hit Gene Code | At4g20980 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) |
| Insertion Classification | CDSi |
| Confirmation Status | failed |
Gene hit T15F16
| Sequence (A. th genome BLAST matches underlined) | >14-012073-strizhov-F2-8409 GTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGACTCTCATGGGAATGG GGGATCGGACCAAACTTGCATGGGATATATATAAGGGTGTGTTGGACAAAATAATCACTT TTTCATACTTAATTAGGAAAGTAGTCATTTTACTATTCATAATTTGTAAAATAGTCGTTT TTTGCTGTTTGATTCGTACACTTACATTGTACATCACTTTTAATGTACAAATGTAAAGTG CACGCTGTATATTTTTATATATATTTGTACACTAAAAGTGGTGTACAATCTAAATGTACG AATCAAACAGCGAAAAGTGACTATTTTACAAATTATAAATAATAAAGTGACTATTTTTCC AATTAAGTTTAAACAAGTGACTATGGGATCCTCCCTATAGTGAGTCGTCTCA |
| GenBank Accession | AL755656 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr4:5456704 - go to primer design |
| BLAST e Value | 3e-153 |
| Hit Clone Code (BAC ID) | T15F16 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
