SimpleSearch - Line and FST details


Line specific information

 
Line ID 102C06
Vector Used pAC161
Line Availability available as T3 set from NASC (N409726)
Segregation Analysis 50:48:46
Confirmed for Hit At5g15470
Parent of DUPLO pair none
Parent of pair(s) 2616, 93681, 93683

Gene hit At5g15470

 
Sequence (A. th genome BLAST matches underlined) 
>43-K012380-022-102-C06-8409
AATTGAAGACCCTAAAGACTATAATTTGGTTCAAATCTATGGGATCCTCCCTATAGTGAG
CGTGATTTACTCACTCATAGCTCACGCTGTATGTATCTCAATTCGGTGTAGGTCGTTCGC
TCCAAGCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGT
AACTATCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACT
GGTAACAGGATTAGCAGAGCGAGGTATGTAGGCGGCGCTACAGAGTTCTTGAAGTGGTGG
CCTAACTACGGCTACACTATGGGATCCTCCCTATAGTGAGCGTTNTAACTTAANTGGGCN
NTGGAATCCGAGGAGGTTTCCGGATATTACCCTTTGTTGAAAAGTCTCANTTGCCCTTTG
GTCTTCTGAGACTGTATCTTTGATATTTTTTGGAGTAAACAAGCGTGTCGTGCTCCACCA
TGTTGACGAAGATTTTCTTCTTGGCATTGAGCCGTAAGAGACTTTGTATGAACTGGTTCG
CAGTCTTTACGGGGAAGTTTGGTAAGGCCCTCTATGNTGAATCTTCGACTCCTGGGAAAC
GGGGGGCTCCTCTTGGGAATCTTGCACATATGAACTCCCCANTACAAAAACCCGGGGGGA
ATTTTTAAAAAACCCCCTTCCACGGGAAAAAAGGGGCCGGCCTCTCCCNCCGAGCNGGGG
GAGGCACGCCATATTGAAGTTTNCGTGGTTTTTTTCCGAAATATTTGTGGAAAAANTGGG
NAATTGGGGGGCCTGGGGAGAAAAAAGAGAAATG
GenBank Accession FR803022 [GenBank]
Graphic View Graphic view of gene At5g15470
Predicted Position of Insertion Chr5:5023496 - go to primer design
BLAST e Value 6e-06
Hit Clone Code (BAC ID) T20K14
Hit Gene Code At5g15470 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation galacturonosyltransferase 14
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37