SimpleSearch - Line and FST details


Line specific information

 
Line ID 105E07
Vector Used pAC161
Line Availability available as T3 set from NASC (N410039)
Segregation Analysis 100:91:72
Confirmed for Hit At5g07120
Parent of DUPLO pair 12290
Parent of pair(s) none

Gene hit At5g07120

 
Sequence (A. th genome BLAST matches underlined) 
>53-K012137-022-105-E7-8409
TTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTAACCGGCTGGACACAGCACCATC
CAACATCCTATGGGATCCTCCCTAGTAGTGAGTCGTGATTACTAAGCTGCTATGATTCCG
CGAGACCCACGCTCACCGGATTGAGATTTATAACAGTAAACCATCCACGCGGAAGGGCCG
ACCGCAAAAGTGGTCCTGCAATTGTATCCGCCTCCATCCGTTCTATTAATTGTTGCCGGG
AAGCTATGGGATCCTCCCTATAGGGAGGATAGCAACTAACTCTATAAGACTCAGCTAATC
TATCAGCCAATGTAACAATGTCTCTGAATCTTCTCCTCACGCTAAACTCCGATCCACCGT
AGTCAGAGAGATTCGTTCTATGGGATCCTCCCTATAGGGAGTCGATACACTCACCAGGAA
TCATTGAATTTGTGGCCTCTTGCTCTTTCTGAGGGTTAGAAACAGTGATCTTGATGTAAT
CANAGCTCAAAGAAGACGGAGATCTATGGGATCCTCCCTATAGTGAGTCGATTTACTC
GenBank Accession AL756099 [GenBank]
Graphic View Graphic view of gene At5g07120
Predicted Position of Insertion Chr5:2208516 - go to primer design
BLAST e Value 4e-50
Hit Clone Code (BAC ID) T28J14
Hit Gene Code At5g07120 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation sorting nexin 2B
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37