SimpleSearch - Line and FST details
Line specific information
| Line ID | 105F05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N410049) |
| Segregation Analysis | 100:97:27 |
| Confirmed for Hit | At5g54470 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At5g54470
| Sequence (A. th genome BLAST matches underlined) | >38-K018337-022-105-F05-8409 ATTTCCCGGACTGAAGCCTTTACATTGAATCAAGAATATAAAGAATATATTCATATTCAT ACAGCGGAGAGGATAAGATCCAAATCAAGTCTCGTCCTTTTCACCACCTGATCTCCTTCA CCACTACTAACCGAAGACGACGAACTCACCACCGGAAGTTCTTGCTCCACCGCAGCCGGA ACAACCTGATTCTCCTCTTCTTCTTCTTCTTCATCCTCATCGCTATCCTCATCAGAAGAC TCAGCTGCGTCGTTACAACCAATGATCTCTTCTTCTTGGATAAGATGGTGATCCCTCCCG GCGAGGGAGCTGTTGTTATTCTTCTTACGAGCTAAACAAGACTCACAGATAGAAACAGGT GGGCCAAGATGCAGCCCAGAAGCTTTCCCAGGCGTGTGTGACTGACACGCGCTACATAGA AGACAACGCATGTGTTTCGCCACCAGAAAATTAGCTCCGTGAACTTTACCGTCACAATGA CAACATAAACTCGCTTGATCTGACTCACAATACATTCTCGCTACACCACAACATAACTCG CAGTTCATCTTCCCCATCGA |
| GenBank Accession | BX001262 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:22114807 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F24B18 |
| Hit Gene Code | At5g54470 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | B-box type zinc finger family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL756107 [GenBank] |
Gene hit K17N15
| Sequence (A. th genome BLAST matches underlined) | >38-K012182-022-105-F05-35St TGACGTAAGGGATGACGCACAATCCACTATCCTTCGAAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTGCCCGCCTTCG GTTTAAACTATCAGCGATCAGATTACAAAGAGGTCATTGAACTGACATTAACATTATGCT ACTTTGAAATACGACTATGGGATCCTCCCTATAGGGAGTCGTAGGACTGACTGGGAAGGA AGAGAGAGTAATTACCGATCAGTTTTCACCGGGTATATGTAGATGCCCAAAGGGATATGA TCGGAGGAATGTTCATAACGGAAAGTCGACGGATGACGATCCACCGAATACAAAGGCGAA GGCAAAAAGCAACAAATTTTAAACCGGAAATCTTTATTTCGACGTGTCTACATCCACGTG CATATGGGGGCTTACACCAGATTCTTCACAAGAGAAGCCTCGCCATCGGCGCCCCGAGAT GCCCATTACATCATCCCAATGGTCTGTGATTATGCGACAAGATACACTCATATGCTTACA CACTGACA |
| GenBank Accession | FR803101 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:20954749 - go to primer design |
| BLAST e Value | 4e-13 |
| Hit Clone Code (BAC ID) | K17N15 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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