SimpleSearch - Line and FST details
Line specific information
| Line ID | 107A03 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N410179) |
| Segregation Analysis | 50:48:44 |
| Confirmed for Hit | At1g78240 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 95359, 95360 |
Gene hit At1g78240
| Sequence (A. th genome BLAST matches underlined) | >17-K012377-022-107-A03-8409 NTTGATCCATGTAGATTCTCCCGGTACTGAANGCCTTTACAATTGAATATACCCATTTTG TTAGACATTTCTTTGTTTTGTGTTTTCGGACCCTAAAAATTTAGGGAAGCGCCTGTAATT TTTAAAATGTTAAATATTTATGCTGTGGTTTCAAAGACAATTTCAAAATAGCTCAGATCA TGTGGTCCAGTGCATTTTTGACCGAGCCTGGTTGTATTCATCCAAGGCATATGTGGTGTT CGTATAATAGCAAGGCATGGATATTTGATTCTGATGGCAATGAACGTAGATCAAAAGTTA CAAAATAATCCTACCATAAGAACACACTATGGGATCCTCCCTATGGGGAGTCGTAATGGC TGAGATGGATCTTCATCGCCGGGTCTTTTTGGATGATCAGAGAATATCAGAGGAGACAAG AGAGACCAGTATTCTCTCACTGTTATCTTCCAGTTCTCAGCATCCTCTCCAAGCACCTCG GGGTGAAGACCTAAACCAACCCCAGGAATCAAAATGAGATAACAAAAACTGCAGACATAT GGATTCAGAAGCAATTTGTTACTACGGAGACTAACCATATAATGAAAANTTCAGTCTTGT TCATGTTAAACCGGCTATGGGATCCTCCCTATAGTGAGTCGTTTTAC |
| GenBank Accession | AL756226 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:29433495 - go to primer design |
| BLAST e Value | 2e-132 |
| Hit Clone Code (BAC ID) | T11I11 |
| Hit Gene Code | At1g78240 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T25O11
| Sequence (A. th genome BLAST matches underlined) | >17-K012498-022-107-A03-35St TGACGTAAGGGATGACGCACAATCCACTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTTTGATAATTAATAATGGTTAATTAGGTTTTTCATGTTTATGTT CTTAAACGTTTAGAGATTATTTATGCTACAACATCGATCATTGAATTGATTATATTGTTT TACTAAACAGCTCAAAATAAATATAAAATTGATTAGGCCCACCGGTTTGAAACCCAACAT CACTAAAGGACCCACTGGCCAATGTTAAACGGGTCGGATTTTTTAAACCCCCCGTTATAT CAAACCGGGCGATTTCACTTAAATGTCGGTTTATATACCCTTTCGTTACAAATCTTTAAC CCTTAAACCCAAATTCCCAGAATTTCTGGAGACGAAGAACAAAAATTTTCTCGAGAAAAT GATAATGGAGGAATCTTCGAATCTCATGTTGAAAGCGAGAGAGGTTCTTGCGACTCCAAG CCACAAAGGACTCGAGAAAATCGTCGAACAACTCTCAATGCGTCAAGACCCCAAAGAATA TGAAACTGCGTTTGCTCTTTTCTGTTTCTGCGCTGATAACTTCCCAAATTGCTTAACCCT AATGTTTCTCAAACTATATCGACATTCTTCCAATGGCGTCATCAGATTCTATTCGCTTTA TCTNCTCTCCGAAACCCTCGTCGGTTTCAGAAATCGAAACTGGGAACTCTCTCGCGTCGC TCTCCATGAAATCAAACCCTTGTGATTGAATGTTTAACGATGCAAGAAACCAAGGATCTG ACATGAAGT |
| GenBank Accession | AL756227 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr5:14863738 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T25O11 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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