SimpleSearch - Line and FST details


Line specific information

 
Line ID 108H10
Vector Used pAC161
Line Availability available as T3 set from NASC (N410366)
Segregation Analysis 50:47:38
Confirmed for Hit At3g59570
Parent of DUPLO pair 11669
Parent of pair(s) none

Gene hit At3g59570

 
Sequence (A. th genome BLAST matches underlined) 
>80-K012313-022-108-H10-8409
CTGCTCTTTGAAGCCCGGTCGCTCTTTGAAGTTGATTCACTATTTGTAGCTGAGCCTTTT
CCATCATCTATTTTAGTGGGCCCCCATATCTACTCCAGATCGTTTCGGAAGCTGAACAAC
CTACGGCGTTCAGCAATCCTTCTCTAAAGGTTCTGCAAAAGACTCATCAAAATCAGCAGC
CCACATCATCTACAACAGATAAAGATCCATGAATACATATGCAAGAGTACTGAATCTGGT
ACGTGAAGGCACATATGTATAATAAGAAATCCAAGATTCTCTTTTCTACCAGTCTCTTGC
AACCACTACATAACTAAAATCCATTTGTTATCATGAGTGAGACACAAATTCTATGGGATC
CTCCCTATAGTGAGCGNTTAACTTCAANGNGNCNGNTNGCTGGGCAATGGAATCCGAGGA
GGTTTCCGGATATTACCCTTTGTTGAAAAGGCTCAATTGCCCTTTGGTCTTCTGAGACTG
TATCTTTGATATTTTTGGAGTAGACAAGCGTGTCGTGCTCCACCATGTTGACGAAGATTG
TCTTCTTGTCATTGAGTCGTAAGAAACTCTGTATGAACTGGTCGCCATTCTTTCGGGGAG
TTCTGGTAGGGCCTGTATTTGAAATTTTGGCTCCATGGAAAATGGGGATCCTCTAG
GenBank Accession AL756414 [GenBank]
Graphic View Graphic view of gene At3g59570
Predicted Position of Insertion Chr3:22001864 - go to primer design
BLAST e Value 7e-160
Hit Clone Code (BAC ID) T16L24
Hit Gene Code At3g59570 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Ypt/Rab-GAP domain of gyp1p superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37