SimpleSearch - Line and FST details


Line specific information

 
Line ID 120C08
Vector Used pAC161
Line Availability available as T3 set from NASC (N411456)
Segregation Analysis 100:81:61
Confirmed for Hit At5g21030
Parent of DUPLO pair none
Parent of pair(s) 3725, 3815, 9807

Gene hit At5g21030

 
Sequence (A. th genome BLAST matches underlined) 
>59-K012516-022-120-C08-8409
TTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCAATG
ATACATGTTAGGTTCTTGGAGTAGATTGCATGCATGTCGACTCTATGGGATCCTCCCTAT
AGAGAGATCGTATTACTCATTCTCTATGAACCCGCAGGAACAATAATTGACACCGACATC
TGTCACCAACACAACATCGATTTATATCTTTGCGCTCATGCTGGAAAGATTGCAAGTGAT
AAGCATATATATCATGATGCTCGAATCCTTTATGAATCGCACAAAAACTTAGAAACACTT
TTCGATGTGATATGGAACTACAGGGCCAACACATTACCATGTGCTCTACGACTAGATTGG
ATTTGACACAGATCATCTCCAAGAACTTGTGCATTGACTATGCTATGTGCAAACACCACA
TCACTTCAAACTGTTTTGTACCTGATACATTAAATCTCTGCATCGAATGTACCCATTAAT
CACTTAATTCTTTGATGTATTACTTGTAGCTACCAGAGGAGCACAACTGCCATCTCTGTT
GGTAATTCGTTGGGCATTCGATATCGTCGCTTTGTGTGTCGCATTTGAACAATTGACACA
ACTTGATTATTATGCTATNTGCGCGATATGTTATGCTCATTTGGGGGCTGGACACATGGC
AACTGAAATGAAGTTTGAAGACTTGGCTGAAACTTTATCGGAGCACCGCGGGGACACCAC
AGCTGGAACCAGTCCCTGTGCCTGCCATGCGGAAGCTGAACACCAACGTTGCT
GenBank Accession BX649705 [GenBank]
Graphic View Graphic view of gene At5g21030
Predicted Position of Insertion Chr5:7140626 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F22D1
Hit Gene Code At5g21030 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation PAZ domain-containing protein / piwi domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37