SimpleSearch - Line and FST details


Line specific information

 
Line ID 121H11
Vector Used pAC161
Line Availability available as T3 set from NASC (N411615)
Segregation Analysis 50:46:42
Confirmed for Hit At1g62490
Parent of DUPLO pair none
Parent of pair(s) 4870, 7396, 7404, 10934, 52781, 89504, 89505, 89506

Gene hit At1g62490

 
Sequence (A. th genome BLAST matches underlined) 
>88-K012552-022-121-H11-8409
NTGATCCATGGTAGATTTCCCGGGCCTGAAGCACCTAACTTACGTATTCTCGGGAGATGA
CAAAATGGGTGATGCAGAAATAGACTTTAGGCCGTTCCTATGGGATCCTCCCTATAGTGA
GTCGTATTACTCAAACATAGATTTGAGCGATTATGCCCAAAAGGCCCAATACTCTGCTCA
TGTCTTAATCTAAAACACAGAGGACAAATTCTGATTTCCACTCTCCAAAATCCTGGCTTT
ACCTATGAATTTGGGTTCTAACATTGATCCATGCAGAGGACCAGATTTGGCTGCGCATGA
GAAGGGTCCTCTGATACTCCATGGAAGAAACATTATCTAGTTACATAATTGGCGTGCCTT
AAACGTGTCAGTGAGGCCGTACCATAACGAATAATCTGATCTATTACACTCCTTAACCAC
TTGCGTTATGATATGCTTCCTGTAGAGCACCATACCAACTAGTCACGGGTCACATTTAAG
CTTCAACTATATATTTGCATGCTATTTGCCAAAAGGATTCGACAATAATGCAACAAGAGT
TTCATTGAAAATTTCAAGAACCCTATGGGATCCTCCCTATAGTGAGTCTATNNACTCAAN
CNNCCNNTGTCTAATTGTGACCTGTTCTCCCCAGGCAAAGAAGAGAGCCACCCGTGGAAC
TTTCGTAGACTGATCCGTCCCAGTGCAATGGCTCGGAAGGCATTTAATTTAGATTAAAGT
TTTTCTCTTCTTACCCAAAAGAGTTAAGGCATAATCCCAACAAAACTTTGGGGAAACAT
GenBank Accession AL764152 [GenBank]
Graphic View Graphic view of gene At1g62490
Predicted Position of Insertion Chr1:23131661 - go to primer design
BLAST e Value 1e-47
Hit Clone Code (BAC ID) T3P18
Hit Gene Code At1g62490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Mitochondrial transcription termination factor family protein
Insertion Classification 5' region
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37