SimpleSearch - Line and FST details


Line specific information

 
Line ID 131D06
Vector Used pAC161
Line Availability available as T3 set from NASC (N412522)
Segregation Analysis 50:44:36
Confirmed for Hit At1g14010
Parent of DUPLO pair none
Parent of pair(s) 7948

Gene hit At4g00630

 
Sequence (A. th genome BLAST matches underlined) 
>44-K012721-022-131-D06-8409
TTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATCCTGCTACA
CTAAAGATATAACAGCCTACTTTTAGGGATCCTCCCTATATGAGAGTCTTATTACTTATC
TGAAAGACTTATCCCATTTGTTGCCCTCGATGTCAGCAGGTAATGTAACATGCTTGCCTT
GTCTTGCTCAATGTATCTAACCAGCTCTTTATTTGTCTCATTTCGCACCAAAAATCTCTT
ATTTTACAGTGATAGAGTAGCAATTGGTCGTTCCCTATGGGATCCTCCCTATAGTGAGTC
GTTTTA
GenBank Accession AL764819 [GenBank]
Graphic View Graphic view of gene At4g00630
Predicted Position of Insertion Chr4:262682 - go to primer design
BLAST e Value 1e-84
Hit Clone Code (BAC ID) F6N23
Hit Gene Code At4g00630 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation K efflux antiporter 2
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g14010

 
Sequence (A. th genome BLAST matches underlined) 
>44-K013050-022-131-D06-35St
ATACTGACGAAGGGATGACGCTCANTCCCCTATCCTTCGAAGACCCTTCCTCTATATAAG
GAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCT
TAGGCTTAAACTGTCAGCGATGAAACGCATGATATATAGTAGTATCCCATAACTATTCTC
TAAATCGAACTATCTAAACTTCTATGGGATCCTCCCTATAGTGAGTCGTATCACCTCAGA
CATAGTGCTGGAAAGTGGAATTTTATATCTGAAGTGAGAAATGCTATGTAGCCTTGGTTT
ATAGGTGATGTTGGTGCATAGGCTTGGTTAGAACAAGGCCATGAATCACGCTGACACGGG
CTCGCGTGATACTGACCTGTGTCTGCAACGCTGCATCTGACAAAATAGCTGTATTAGTTC
CACCTTTGAACCCCATCGATTTCTTCACCTCATCCAGGATGTCTTTCCCTGCTAAATGAA
AGTGGATAGGACTATGGGATCCTCCCTATATTGAGTC
GenBank Accession FR803844 [GenBank]
Graphic View Graphic view of gene At1g14010
Predicted Position of Insertion Chr1:4801220 - go to primer design
BLAST e Value 4e-81
Hit Clone Code (BAC ID) F7A19
Hit Gene Code At1g14010 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation emp24/gp25L/p24 family/GOLD family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37