SimpleSearch - Line and FST details


Line specific information

 
Line ID 131E05
Vector Used pAC161
Line Availability available as unconfirmed T2 stock from NASC (N2108313)
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At2g47160

 
Sequence (A. th genome BLAST matches underlined) 
>131E05-LB-2-19357598-R-150-a
CACACAAAACATAAACTAAAGAGAGATTCAAGAAGCTCTTTTCTTTTTCAAGAGCTAAAG
ATCAAATTAATTAACTAATTAAACATTCTTAATCCATCCTCATTAGATTAGTTGTTTTAT
TAAGCTTCCTGAATATATAATCTCAGTTCG
GenBank Accession KG781677 [GenBank]
Graphic View Graphic view of gene At2g47160
Predicted Position of Insertion Chr2:19357598 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) F14M4
Hit Gene Code At2g47160 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation HCO3- transporter family
Insertion Classification TS2TE (3')
Confirmation Status unknown

Gene hit At1g77330

 
Sequence (A. th genome BLAST matches underlined) 
>131E05-LB-1-29063233-R-150-a
TAGAAAACGAGGCTCTTTAGGCATGAACTTCTGGTTTGCATAAACATCCATGTAATCTCC
AAACACAAACTTTGGATACTTCTTCTCACTTCCTTCCTCTTCCGCCACCGCGGCTGGCCC
TATCGCCGCCTTGTACGACGGATTGTAGAA
GenBank Accession KG781676 [GenBank]
Graphic View Graphic view of gene At1g77330
Predicted Position of Insertion Chr1:29063233 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) F2P24
Hit Gene Code At1g77330 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit KG781676 [GenBank]

Gene hit At1g27600

 
Sequence (A. th genome BLAST matches underlined) 
>131E05-LB-1-9606334-R-150-a
AATAAGTAATTCTAAGTTTTATCATCATATAAAGTAATGGCCTCTACTTACCTATTATCC
ACTATACTTGAATGAGTTCTAAGTTCTAATTACATTGAAAATTTTATTTATTTTAGCGGT
AATAAAAATAGATATAACTCATATGTCAAC
GenBank Accession KG781675 [GenBank]
Graphic View Graphic view of gene At1g27600
Predicted Position of Insertion Chr1:9606334 - go to primer design
BLAST e Value 3e-80
Hit Clone Code (BAC ID) T17H3
Hit Gene Code At1g27600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Nucleotide-diphospho-sugar transferases superfamily protein
Insertion Classification Promoter
Confirmation Status unknown


Last Updated on 10.06.2021 13:37