SimpleSearch - Line and FST details


Line specific information

 
Line ID 134C04
Vector Used pAC161
Line Availability available as T3 set from NASC (N412796)
Segregation Analysis 100:82:59
Confirmed for Hit At2g44490
Parent of DUPLO pair none
Parent of pair(s) 6201, 6212, 6250, 6258, 70221, 70612, 70623

Gene hit At2g44490

 
Sequence (A. th genome BLAST matches underlined) 
>27-K104607-0022-134-C04-8409
ATTTACATTGTATATTTGAGAATTGAACGGTTGTGGAGATATTTATGTTAGGTGATGTGT
ATATGCAGAGATGACTTCAGAGACTATGCGAGTCTCTGCTTCGAGAGATTTGGGGACAGA
GTGAGTCTGTGGTGCACAATGAATGAGCCGTGGGTCTACAGTGTCGCGGGCTATGACACA
GGAAGGAAAGCGCCAGGACGGTGCTCCAAGTATGTTAATGGCGCTATGGGATCCTCCCTA
TAGTGAGAGGNNNNAAAATANTNAAANNNCNANATGTATGCAGGTGNGTATACACAAATG
ATCTGATAGAATAAGAGAAAAAGAAAAGAGATCGGAATAACCCGGGAAGGGGAGGTTAAA
TGATTTATAAGGAAGGAGTGGAGGGAGGAGAGGAAAGAGAGAGGAAAAGAAAGTATCGCA
TGAGAGAGAGAGAGTAAGAGACAAGCGAATGAAGAAGAAGGTATGGGGTGTAAATAAGTG
GCAGTTAAAAAGAAATAAGCGAAAAGGTATGAATGAATTAGAAAGATACCGAATAATAAC
GAAAAAACAGAAAAATATGAGAGGGAGTATGGGGAAAGTTAGGGACATAAAAATGATTAG
AGAGAAAGAATGATCAGAGGATGGAATAAAGATTTATAAATAAAAATTGTTAAATAGATA
GAGATAAAGGCGTGATAGTAGCAAGTAGAAGGGGAAAGACGTGCGCAAGTGAGAGGGTTA
GAAAAAAAATGGTGAGAATAACGGAATAAGTTAGTGATGAGACACAGACAAGAAAAGAAA
AAAAAAACAAGTAGAATAAGAAACAGAA
GenBank Accession FR803929 [GenBank]
Graphic View Graphic view of gene At2g44490
Predicted Position of Insertion Chr2:18365749 - go to primer design
BLAST e Value 3e-107
Hit Clone Code (BAC ID) F4I1
Hit Gene Code At2g44490 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Glycosyl hydrolase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit BX572185 [GenBank]


Last Updated on 10.06.2021 13:37