SimpleSearch - Line and FST details


Line specific information

 
Line ID 134F03
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 10113, 10146, 78597, 78783, 78792, 78794, 78797

Gene hit F15L11

 
Sequence (A. th genome BLAST matches underlined) 
>22-K012718-022-134-F03-8409
TTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATGGAATATATCACTGAGGG
GGATATATACTTACCTATGGTGTACTCCCTATATATGAGACGTACTCACTAACAAATCTC
TATANTAATATGTGATAATCATTTTAGGCGACAGATTATCTGAACCAAACAGATGCCATA
TGGACGTGACCCCGAACGAAATCGAGATGGAATTCAAACTGTTTATGGGATACTACATAT
AGTGAGTCGTATTACTGAGAGTAGTGAATATATGACCATATTACACGATGATGAGTAAAA
TATTGCGTTGGTATGAAGGGGAAGAGTTGGCTGTAAAAAAAAGAAGTAGGTTGCCTATGG
GATCCTCCCTATAGTGAGTCCAGTTACTAAAGGGCCTGGAAAGCGAACACGCTGCCGGAT
ACGGGACTCAACATTGGGCAG
GenBank Accession AL765071 [GenBank]
Graphic View Graphic view of sequence AL765071 of line 134F03
Predicted Position of Insertion Chr2:1825500 - go to primer design
BLAST e Value 9e-33
Hit Clone Code (BAC ID) F15L11
Insertion Classification Genome Hit
Confirmation Status unknown

Gene hit At5g40920

 
Sequence (A. th genome BLAST matches underlined) 
>22-K104607-0022-134-F03-8409
CCCTAAGAGATCTCTATCAGAATATCTGTTAATTTTTTTTGGCGACATATTTCCTGAAGC
AAACAGATGCCTTATGGACGTGACCCCGAACGAAATTGTGTTTGAATTCAGCTCCGCTAT
GGGATCCTCCCTATAGTGAGACNNNTNNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GenBank Accession FR803973 [GenBank]
Graphic View Graphic view of gene At5g40920
Predicted Position of Insertion Chr5:16403671 - go to primer design
BLAST e Value 1e-41
Hit Clone Code (BAC ID) MHK7
Hit Gene Code At5g40920 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification CDSi
Confirmation Status unknown
Other FSTs Supporting this Hit FR803972 [GenBank]


Last Updated on 10.06.2021 13:37