SimpleSearch - Line and FST details
Line specific information
| Line ID | 137E09 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N413113) |
| Segregation Analysis | 50:30:26 |
| Confirmed for Hit | F12F1 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 68057, 96907 |
Gene hit F12F1
| Sequence (A. th genome BLAST matches underlined) | >69-K012802-022-137-E09-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTTG GCGTATATGACCCGGTGGATGTTGCATAGCCGGTTTCTTCACACACCTGAACCGGGTACG CAGCTAGGTTACATTGCCAACTGAACCCTGTGCACCTTCCTCCCTGCACTGCGAACGACG GTGCATCGGAGAAGATCCACATGGGACTTTTGAAACATCATACGGACGACGCAGTTGCGA GAAATGCATACGATTCTGGAGAGAAACCGAAGCAACGGGCAGACGCGCATCGCTGATAGA TGAGCATGTGAACGCAGAGTCAATCGAGCCATCGCTCACGGAACCGGGCCCCCCTTCCTT GTCTAAACACTCACTCCGCAGGCATACCGATACTTGCTTCGGACGCTCAGAGCTTTCCCA ATCATATTACATGTTGTCAAGATGCGACTACGCCACACCACAGGCTGCTGACCTGACACT TGAAACGTATATATCTTGACGCGAGTANTCGCCAAGAAGTGTAAAGTGCTGGAATAAAGT GCGATCAAGCACTCTTTGAGCTGTTGGAACGCCCAAAAGGTTCGAATCCACAGTGTGCCA ATGGGTCTCGCAGCACCTGGGTTTTCCTCAAGCACCCGGTTTAAACTCANTAAGGGACCC CCTCAAAATGTTTCTGTAGAGCAACCGCACTA |
| GenBank Accession | FR804067 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:4016193 - go to primer design |
| BLAST e Value | 1e-19 |
| Hit Clone Code (BAC ID) | F12F1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g41768
| Sequence (A. th genome BLAST matches underlined) | >69-K012753-022-137-E09-8409 TTGATCCATGTAGATTNTCCCGGACATGAAGCACTTTTTCGTATTTCATAGTCAGAGGTG AAATTCTTGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCAT TAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTATGGGATCCTCC CTATAGTGAGTCTATTTACTCACTTTTTAACTGCAACAACTTAAATATACGCTATTGGAG CTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGAT TTAGATTGTACTCATTCCAATTACCAGACTCGAAAGAGCCCGGTATTGTTATTTATTGTC ACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGT AGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCAC CATGGTAGGCCACTATCCTACCATCGAAAAGTGATAGGGCAGAAATTTGAATGATGCGTC GCCAGCACAGAGGCCATGCGATCCGTCGAGTTATCATGAATCATCAGAGCAACGGGCAGA GCCGGCGTCGACCTTTTATCTAATAATGCGTCCCTTCCATAAGTCGGGGGTTTGTTGCAC GTATTAACCTCTATGGGATCCTCCCTATAGTGAGTCG |
| GenBank Accession | AL765298 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:14198448 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F21A14 |
| Hit Gene Code | At3g41768 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | rRNA |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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