SimpleSearch - Line and FST details
Line specific information
| Line ID | 146D02 |
| Vector Used | pAC161 |
| Line Availability | not available |
| Segregation Analysis | unknown |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 3569, 8192 |
Gene hit F24O1
| Sequence (A. th genome BLAST matches underlined) | >12-K012980-022-146-D02-8409 GCGTTTTATAGGTAAGTGACGTGCTTGAGAGAATCTTTAGGGAGCATGTATCCAAGTTTA TATATAGAGTTAAAGTCGGTGACGGTGGCTCCAATCTATTGCCGCGTAATTAAAGGTCAG TCTTTTTGTCTCCTCCTTCGACGTGCTTATCAATATGTCATAGTATTAAACTTATTAACA CAAAAATTGATTGATTACTTGTAATTTTATAACAAAATTAGATACGACTTCTGAGTTTTT TTTCTGACTGTTATTTTTATAAAGAAGCACATGGGAGTTCTTAGATGTCACAATTAGTGA GGTGGGGTCTCTTTTCCCATGTGCTAAATTATATTTTCTCCCAACAAAAACCTCTCAAAA TTTTCAATTTTCTCAAACTCTTGAAACTAAGAAAAAATGTTGTTGTTTCCTTCTACTTCT TTACGGCTCTTCTTCTTTCTCTTCCTCTTGTNCTCCTCTTGTTTCTTACAGATTANAGGA GATGATGATGATGATGATATAAGCGATGATAATATCAAAGTCGACCCGAGTCTCAAGTTC GAAAACACAAGTCTTCGACAAGCCTACATTGGCTCTTAATCATGGAAACAGACTATNTTT CTCTGGATCCTTTAACCTTACTGGTAATTGGAATGGCTCTAATGTT |
| GenBank Accession | AL766032 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:23112539 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F24O1 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
| Other FSTs Supporting this Hit | FR804331 [GenBank] FR804331 [GenBank] |
Gene hit At1g07193
| Sequence (A. th genome BLAST matches underlined) | >12-K104555-0022-146-D02-8409 AGCCATTTACAATTGAATATATCCGTCTTTTTATCATGCATGCATGTCGACTCTATGGGA TCCTCCCTATAGTGAGTCGTATTGCTCTGGTAGCTGGGGGATTATCTTAAAAGTCAATCG AATTCTCATGTATATGTGACAAAAGATAATGGTGGGCTGGCCTCCTCTTATTGGAATACA ATGGGATCAGCGGGGTACTGGGCAGGTGTAAGCACGTCACATGGATACAACGCGGTATGC GAGAGACGAGAGAGGGAAGGGAGAGCCGAGAGAAAGAGGAAAAGGGAAAGCAGCGAAGGT GGGAGGGATGCGAAATGATAGAGGACGCCGGTAAACTGAAGGGGAGTGAAGGAAGAAGAA GCAGTAGAAAACAGAAGGAGAGAAGGGCGTAGAAAAGAAAAAGAAGGAGGAAGAGCAGAA AGGATGGTAGAGGTGAGCAGGTTGGAAAAGAAAGAGAGAGAAAGTGAAAGAGGTGAGAAA TAGAGTATAAGGGAGAAAGGAAGATGGGTCGGAAATTAATAGAAAGAGCTGAAGTAGAAG GAAGAGGAGTGGAGGATGAAAGGGACGGGGACGAGATTCGAGGAGAAAGAGTAGAACGAC ACAGACGTGAGGGAGGAAAGAAGAAGATATAATCATAGAAGGGAAGAGAAGTGAGAATAA GAGAAGGGAAGGACAGAGAGGAAGAAAGGAACAAAGAAGCAAGAAGAAAGGACGGAGAAG AGAGAAAAAGAAGGACGGCGGGGAAACAGTAAAAGGAGTCGCAAGAAGCGAACAAGAGGA GAGAAGAAAGAGATGTAAGAAAAGGACAGAGAAGGAGGCAGACAGAATAGGATACGAAAG AGAGAGAAAGGACAGGCGCAAAGAAAACGGAAAGAGGCCACATAAGGCGATAACGGATAG GAAAGCATAGATCAGAGAGATATTGTAGGGATAAGAGGAAAGAATACAAAAAGAGTTTGG AGACAGATGATTCACAGGCGAAGCGGAAAGATGAACAAGAAAGGGGGACAACGAGGAGAA AGGAGCGAACGCAGAAGTGCAAACGAATAAGAATTGAAAGTGAGGAGAAATGTGAGGAAG TAGCAAGAGGTGCGAATAAAGAGAAAGAGAGAGAGGAGAAAAGGATGAAAGTGAGATTGG AGTAATGAAAAACAAGCGAGAAAATAACGAGACAAAACAGAAGGAGGAAGGAAAGAGGGA AAAAGAGAAGAGGAGAAGGTAAAAGGGACCGAGAGCAATGGAGATAACAGAGAAGAAAAT GAGAGGGGA |
| GenBank Accession | FR804333 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr1:16474211 - go to primer design |
| BLAST e Value | 3e-06 |
| Hit Clone Code (BAC ID) | F2J6 |
| Hit Gene Code | At1g07193 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | long noncoding RNA |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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