SimpleSearch - Line and FST details
Line specific information
Line ID | 150H03 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N414391) |
Segregation Analysis | 100:73:53 |
Confirmed for Hit | At4g40020 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At5g37475
Sequence (A. th genome BLAST matches underlined) | >24-K028794-022-150-H03-8409 TTTACACTTTTGAAGATTGCATTTTACCTCCTATAGGATTGTACCTGAGAAGAGGTTTAN NTCGTCGGCNGGNTTTTTGTTTTCTATAAAGAATTGCANNAGTGTTTTTCTTCTGTTTTC TTTGCTCGGNTTGATTTATCAGTTTGTGTAGTAAAATTTGTTGTGGGCGCTTTATTTAAT AAAATATGATTTGAACGACTAAGGGGATCGGGGCAATAGAGAGAAATTATAATACAGATC TGTCGCGAAAGGGTCTCACTATAGGGAGGATCCAATTCGGGTAGGAGAAAAGGAAATTAT TAAAGGAAAAAGAATTTAGAATAGAGGTTGACAAAAGAATAAAAAGATAAAGAATTAAGA GGAAGGAGGAGAAATGACAGAGGCGATTTATTGTGAGAAAATGCAGTCAGCGAGAGTGGA AGATACAGAGAAGAGGAGGAGAGGGGAATA |
GenBank Accession | CR934819 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr5:14866316 - go to primer design |
BLAST e Value | 1e-46 |
Hit Clone Code (BAC ID) | T25O11 |
Hit Gene Code | At5g37475 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Translation initiation factor eIF3 subunit |
Insertion Classification | TS2TE (3') |
Confirmation Status | unknown |
Other FSTs Supporting this Hit | CR770256 [GenBank] |
Gene hit At4g40030
Sequence (A. th genome BLAST matches underlined) | >24-K013398-022-150-H03-35St TGACGTAAGGGATGACGCACAATCCCCTATCCTTCGCAGACCCTTCCTCTATATAAGGAA GTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCGCCTTCG GTTTAAACTATCAGTGTTTAAAAGAATCAGATTTTGGTCAATATGGACAATCAGATTTGA CCAAAGAAAATAATAATATCAGACGATAAAATAGACGGCTCTCGATAAAACTAACCCTAA AAATAAGGAAATAAGTTCCTCTTTGAACCAAATTTTCTTTCTTTGACCAATAGATCTTTT TGTCAACCTCTTAAATATATTCTTAGTCAATCTTCTAATAAACCCATTGGCCATTACCAA AAATTCCTCGGAAACGCTGAATAAAAAACATTCTATCATCTATGGGAGAAGTCGATGAGA AACCGTCCATTGATGTAGCTTCTCCAAGGTATTCATCGAACAAAGTTGCGGATATTGGTA CAGAGCTTTACAAAATGAAAGCTTCCCTTGAGAACAGAGAACACGAAGTCGTTTCTTTAA AACAAGAGTTATTGAAGAAAGACATCTTCATCAAGAATCTTGAAGCTGCAAAGAAGAAAC TGCTTGATTCGCTTAAGGATCAATCGCGAGAGTTAGAGGAAACCAAACGCTTGGTAGAAG ACGCCAAGGTACAGATTGGTTTATTAAAACAAAGAAAAGAACTTTTTACA |
GenBank Accession | AL757598 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr4:18555546 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | T5J17 |
Hit Gene Code | At4g40030 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Histone superfamily protein |
Insertion Classification | TS2TE (3') |
Confirmation Status | confirmed, show confirmation sequences |
Other FSTs Supporting this Hit | AL757598 [GenBank] |
Last Updated on 10.06.2021 13:37 |