SimpleSearch - Line and FST details


Line specific information

 
Line ID 152A03
Vector Used pAC161
Line Availability available as T3 set from NASC (N414499)
Segregation Analysis 99:94:72
Confirmed for Hit At1g33090
Parent of DUPLO pair none
Parent of pair(s) 86167, 86175, 86225, 86231, 86239, 86257, 86259, 86260, 86262, 86264, 86266, 86267, 86268, 86269, 86270, 86290, 86311, 86320, 86334, 86346, 86352, 86353, 86354, 86355

Gene hit At1g33090

 
Sequence (A. th genome BLAST matches underlined) 
>17-K013134-022-152-A03-8409
TGTGTAGTATGGAAACCAGAAGAGATATAATGTCAATTCTTGTTTATTTACCAGATTGCT
ATGGAAACTCTCTTATAGTGAANCNNCNNAAATGCNCTGCCGATGATGATTGCACTTGGG
TTATTGGCAACGGCACGGTGCATTGATATATATACTATACACAGATACACTTCACTTCAC
TGATACTAATTATATCTTATCTTTTTTTTTCTTGGTATGATCTTAATATTATTGATATAT
CACTCTTCTATGGAATTATCTCTATATATAGCGCAAAAGTGTCCAACGAGCTCGGTAGGG
GAAACCCCGAAGGCGCCAAATTTGCAACAATCGTAGCGGTTTTCACGTAACTCTCTATAG
GATAAGGTCTATTCTTCGCCTTCTTGTTTCTAAGGGGAAGAATTGCGTACATTTTCACTA
CAAGTGGAATTTGCGGCACCCGAAGTCGGTGATCTTTCTCCACTTTTACCATTGTCCGTC
CTCTTGAAGCAGGGTTCAACCAGTTCGGTCAGGTAT
GenBank Accession BX546550 [GenBank]
Graphic View Graphic view of gene At1g33090
Predicted Position of Insertion Chr1:11995454 - go to primer design
BLAST e Value 6e-148
Hit Clone Code (BAC ID) F9L11
Hit Gene Code At1g33090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MATE efflux family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37