SimpleSearch - Line and FST details
Line specific information
| Line ID | 154C07 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N414719) |
| Segregation Analysis | 100:74:58 |
| Confirmed for Hit | At4g23920 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 2847, 3253, 97256, 97259 |
Gene hit At2g06296
| Sequence (A. th genome BLAST matches underlined) | >51-K013140-022-154-C07-8409 TTGATCCGTGTAGGATTTCCCGGACATGAAGCACTTTACACTTGAATATGTTGGATACGC ATGCATGTCGACCCTATGGGATCCTCCCTATAGTGAGAAGGGCGAACTCGAAAACTCAAG GAAATAGCGGTTTTTTTCCTCTTGAAAAAAAACCAGAGGGAAGAAAATCCCACGATGTTT TGCGACACAACCCCACCTACGCTTAGGGAATCCTCCCTTAGTAAACGACCAATGCGTCAA CCATCAGTCACACATTCACTATAAAGATAATGGGAAGAATCGTAATCTCGACTCATTAAA ACCTCCCTAAGTGAACCTCTACAAACTTCGTATACCGATTACACCAGGCAAGACACTGTA TGATCAATGATGATGTACTTCGAATGAGTCATTGACCACCACATGAAATGATGGTCTCTG CCAATCCGTACGGATGCTAATGCTTTCTTTGACGGAACACTATCCTTCCCCTCCCTCCTA |
| GenBank Accession | FR804623 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:2485566 - go to primer design |
| BLAST e Value | 9e-36 |
| Hit Clone Code (BAC ID) | F18P14 |
| Hit Gene Code | At2g06296 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
Gene hit At4g23920
| Sequence (A. th genome BLAST matches underlined) | >03-K018347-022-154-C07t-8409 TGATCATGANATTTCCTGGACATGAAGCCATTTACATTGAATATGATGGATACGCATGCA TGTCGACTCTATGGGATCCTCCCTATAGGGAGATGTGTACACACAAAGAAAACTTATTCG CACAGTGTACACAAATATTAACCAGAACCATATGAAAACGATGATACGAAATTCTTCGGG CACACGTTTCCTAAACCAAATCAGCACCGAGAATTTTTCATTTCCGCGGAGAGAGAGAAC GAAAACAGAACCTGGTGGAAGGAGAGGCGGTTTCCGTTTTCGCCGGGGAGTTTCTTCACG CGCTGAAGCGAAGCAGCAGAGGAATTGTCGTAATTGTCAACAACGACGGCGGAGTAACCT CCTTTTAGCAGTTGAAGAACAGTATGACTTCCGATATAGCCAGCGCCGCCGGTAACCAAA ACACTCTTCGCCATCGTTAAGAGAGAAGGCGAAATATCTTAGAAGTTTCGAAATTCTGGA GAGCGTTTTGTTTTTTATTGCGTTTTGGGATTGAGCTAAAAAGGGTTTTATAGAAGAAGC GGTTTTGACTGTATGATTTACTTTCTGATTTCTACGTTTCTTCGAGGGAGACCGAGAGAA AAATGAAGAGGGGAATATTGCTACGTGGCAGGATTTGGTTTGGGTGCGAATATGCCGGAA TGGTGTGAATTGTCTTAATACCCTTTGACGTTTTTGTTTATGGAAGGGGATTGATATNAG TGATCTTCTTTTTTTGGGAACAAATGTTATTTTATTAGGCTCATTAAGATTTAACAAGGC GAAGGATAATTTTGGATGGATTGTAAGCCTAAACTGTTTAGGTAGAAGAGTAGATTGATT TTTCCAGAAAATCGGGGTCACGAGATT |
| GenBank Accession | BX649753 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:12431757 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | T32A16 |
| Hit Gene Code | At4g23920 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | UDP-D-glucose/UDP-D-galactose 4-epimerase 2 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | BX649753 [GenBank] |
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Last Updated on 10.06.2021 13:37 |
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