SimpleSearch - Line and FST details


Line specific information

 
Line ID 154E08
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 6903, 91384
Note

Gene hit At4g11090

 
Sequence (A. th genome BLAST matches underlined) 
>61-K013135-022-154-E08-8409
TTGATCCATGCTAGATTTCCCGAACATGAAGCGCTTTACAATTGAATATATTCCATGGCC
AGGGTTAACCTATGGGATCCTCCGCGTATGGTGATCCCATTTGTGATAAATCCACCATAC
AATTTATTATCTAACTGGACCAAGAACGCGAATATTTTCCATGCTGAAATTCGACGCAGT
TAATTCTAGAAAAATCCCGCGATTGATGCTGTAGAGTGACCATATAATATGGGCACTGAA
TGCCATTTAACTATAAGATCCGATTTGGTGTATCGATATTGCTTATGAAATTCTCATGCT
ATGGAATCCTCCCTATAGAGAATGAGTATATGGGGGGCTACTAACGGTGACTCCATTGCT
CGTAACCATGTCGAGTCTTTGCTTTGTATGCTATCTACCGTAAGGCTTTTACCTATTGCT
TGCTATGGGATCCTC
GenBank Accession AL757954 [GenBank]
Graphic View Graphic view of gene At4g11090
Predicted Position of Insertion Chr4:6765868 - go to primer design
BLAST e Value 5e-31
Hit Clone Code (BAC ID) T22B4
Hit Gene Code At4g11090 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation TRICHOME BIREFRINGENCE-LIKE 23
Insertion Classification CDSi
Confirmation Status failed

Gene hit At2g37080

 
Sequence (A. th genome BLAST matches underlined) 
>83-K018347-022-154-E08t-8409
TGATCATGTATATTTCCCGGACATGATGCATGTCCACTCTATGGAATCCTCCCTATAGTG
AGACAAAAACCACCAGTTTTCTTCAGCATACTTCCATTCTTCTTCTTTGATGATGACAAT
TCATCATCAGTTTCGCCCATATTTTGGAACATGTTGACGTTTCTCCTCCTCAACGGACTC
TGTAAAAATCCTGTTCTCTACCCGTACTTCCCGTCACTGTTATTGTTGTTGTTACCACCA
GACAGCTTAGTAGCTGCGGCTTAAGCTGCATTTCCTCCATTGATCACACTGAACCTCTGA
GTCTCCTAAACTCAACTTCTATGGGATTCCCCCTTATAGTGAGAGAANAAGAAAGAGGTA
TTTTTTTTTTTTTTTCCCCTCCCCAATGGAAATGTCCGCAGCGGTTTTATTAAATGGAAG
GTCATTTTGAAAAAACGACCTGTTTCGGAGGGGCGTATTTATTGGCGAAAGCCATAAACC
AATTATTCTAATTCGGAAATCTTTTTTTCGAAGTGTCTACATTCACGTCCCAATGGGGGG
CTTAGATGAGAAACTTTCCGATCGATGCCTTGATT
GenBank Accession BX285205 [GenBank]
Graphic View Graphic view of gene At2g37080
Predicted Position of Insertion Chr2:15581572 - go to primer design
BLAST e Value 2e-82
Hit Clone Code (BAC ID) T2N18
Hit Gene Code At2g37080 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ROP interactive partner 3
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 154H01


Last Updated on 10.06.2021 13:37