SimpleSearch - Line and FST details


Line specific information

 
Line ID 155G12
Vector Used pAC161
Line Availability available as T3 set from NASC (N414868)
Segregation Analysis 50:50:32
Confirmed for Hit At3g21140
Parent of DUPLO pair 12904
Parent of pair(s) none
Note

Gene hit At3g21140

 
Sequence (A. th genome BLAST matches underlined) 
>24-K018347-022-155-G12t-8409
ATTTCCCGGACTGTAGCTGTTGATGGTGGTGAGCGGAACCTCAAGGTGCGTTGTTTCAAT
CCCTGTTGGTCGCCTTAGAGACTCCAATAAACTTGCTCCTCATTCTTGGCCTTTTGTAAG
CTGGATTTGATTCGAGTGTGCTCTAACGTATTTTCCCTAAAACTTCTGATAGGAACTAAA
TGCCATCTTCTCGAAACCGCTGAGAGAGCTACTGTCTACTGAATCAGAGGTAGACGATGC
TGCTCTCATTTCAATAGATAGCAAAGGAATAGATGTACGGGTTCGTCAAGGTGCTCAGGT
AAAATAACACTGTATTAATTAGTTTTGTCCAGTTGATGTCGACACAATTATGATCATGCA
CAGTGCTTCTCAGCTTATCTTTCTTTGTTCAATTGTTTGTTTTGTTTTTTTGCAGTTTAA
CATACAAAGGCTATGG
GenBank Accession BX285274 [GenBank]
Graphic View Graphic view of gene At3g21140
Predicted Position of Insertion Chr3:7410212 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MSA6
Hit Gene Code At3g21140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pyridoxamine 5'-phosphate oxidase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At2g35150

 
Sequence (A. th genome BLAST matches underlined) 
>95-K013141-022-155-G12-8409
CGGCCCTATGGGATCCTCCCTATAGATGATGTACATGTAATTATATGTTTTAACAGAAGA
TGTCGGTTAAGTACAACTTTTGAGCTTGATTGGTGGAACTGTTAAGGCCCTTGACCAAAA
AGCTTGTTTACCTCTAATGATTTCTCTTGTCAAAATAGATTCGTGAAAGCTAATGAAAAG
TAGTAAAAGGGTAAAATCATAATTGCATAAAATTTTATAAGACCCAATTACGAAAGTTAG
AGAAGTTTCTCTTGTTAACCAGAAACACTGAATTAAGCATTGACATAAAGATATTTTTAC
TCTTGTATGTAATATTTACCATCTACTATTTCAATAATTGCACTCATCACTATGGGATCC
TCCC
GenBank Accession AL758109 [GenBank]
Graphic View Graphic view of gene At2g35150
Predicted Position of Insertion Chr2:14818482 - go to primer design
BLAST e Value 2e-175
Hit Clone Code (BAC ID) T4C15
Hit Gene Code At2g35150 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation EXORDIUM like 7
Insertion Classification Promoter
Confirmation Status failed, line belongs to a contamination group, please check line 013A03
Other FSTs Supporting this Hit AL758108 [GenBank]


Last Updated on 10.06.2021 13:37