SimpleSearch - Line and FST details
Line specific information
| Line ID | 158C08 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N415104) |
| Segregation Analysis | 50:48:44 |
| Confirmed for Hit | At5g61980 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 97153 |
Gene hit At5g61980
| Sequence (A. th genome BLAST matches underlined) | >59-K013215-022-158-C08-8409 NTGATCCATTGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATCTGCTAGAGTT TTCTCAATCTAGACGTTACATAAACTATGAACCAAAACGTTTCAGAACCTATGAAATACA CTACGGCTTACGGCTCACATCGATATCTCGTCCTATCAAGGAAGGATCAAAAACACAATT GTTTTTGGTTTTGCAACTTACTGAAGACCAATTCCATGGCTTGCGGTAATAGTATACCAT CCCACGGCTATCAAGGATAAAGAATCTTCTTTTCCAGTCACCTCTCAAGTTTGAGGAACG TTTATACAGATACCCTTGTCTGATAGTCTGAACCTGAAGAACAGTTATATCAACAGATAA ATATAAAACAAGAGAGTATAAAGATGTGACAGCAGTTTGACGAGTAAGCCTCAATACAAA AGATATTTCCTTACCTTTCCTTTTGCAGCAGATTGCATCACGGCCTCGATGACTTTCTGG GAGTTTCTTGAGTTATGTCTCATGCCATCCCCTGTTGGAGAAACACAGGAGTTTCTATGG GATCCTCCTATTAANGGAANANACTNNTGNNTGAACTGTTCCCCAGTCTTTACGGGGAAA TCTGGTAAGGTCCTCTATTCGAATCTTTGACTTCCTTGGGGAATGGGGGATC |
| GenBank Accession | AL758399 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr5:24897120 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | K22G18 |
| Hit Gene Code | At5g61980 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | ARF-GAP domain 1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit MJK13
| Sequence (A. th genome BLAST matches underlined) | >59-K013242-022-158-C08-8409 TTGATCCATGTAGATTNTCCCGGACATGAANGCACTTTACANTTGAATATCGGAAAGAGA TTATTCACAATCTACATCGTTGCATACTACTACTAAACTAAAACGTCACAGAACCTATGA AATATCATACGGCTTACGGCTCACATATGGTGAGCCTGACTTATAGTGAACAAGCTATAA AAGGAAAGCACGAGTGTTTAGCGGACGCATTAGTCGAGTAAATATTTATTTAACTTGGAT ATTATTTCTTTATCATAAGAATAGTCGTCGGATGTTAAGGAGAAAGTAAAACAAATGAAC GGCGTCAGATACAGAAAATCTGTTTAAAGTATGCCAAAGTAAAACTATAGGGTTTGGTTC GATATCTTGTTGGGCTTTCGATTCGGTAGCTTCTAACCCAATCTTCCGACATATGGCCCG TTTCTGCGGATATATTAAACATTATTTTTCTCCTATGGGATCCTC |
| GenBank Accession | AL758400 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:5261475 - go to primer design |
| BLAST e Value | 4e-161 |
| Hit Clone Code (BAC ID) | MJK13 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
