SimpleSearch - Line and FST details
Line specific information
| Line ID | 159C01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N415193) |
| Segregation Analysis | 50:34:26 |
| Confirmed for Hit | At3g02720 At2g16365 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 6855 |
Gene hit At3g02720
| Sequence (A. th genome BLAST matches underlined) | >03-K012549-022-159-C01-8409 NTGATCCATGTAGATTNTCCCGGACCATGAAGCACTTTACAATTGAATATATCCGGAATA GAAAGTTGTGCCACTAACCAAAAGCTATGTCCGAGTAATACATCGTAAATTAATTCTTTA CCACGGGAGATCTTTCCTATGGGATCCTCCCTATAGAGAGTCGTATTACATATATCATAG CCTGCGTCACGCGTCTGGGATAGCACCTGTACCTGGCGATTTTAACCAATGGGCTCGACA AATCTTGATAGCTCTTTAACCATGTTATCAACATATGCCTTATAGGCCAGGCAGTCTGTA GCACGTTCTTCTGGAATAACACCAGCATCATACTTGCTATGGTCAACTTCATAAAACGTT GCATTGAGCGGGAAGAGGTGACCTAGAGACTCAAGATGTGTGTGCATATTCTCTCAGAAT ACATGACTATGAGGGTGCACAGCTTAAAGAAACTTGTCTACAGTACATTCTATCATCCAA TTACTAGCTCAGTTGGATTGAACCATTTCTAAATATAGGTACATGGAATCGTATATCAAT AGATCAAGCAGCTACACATGGAGATCTATGGGATCCTCCCTATAGTGAGTCG |
| GenBank Accession | AL758491 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:587145 - go to primer design |
| BLAST e Value | 2e-61 |
| Hit Clone Code (BAC ID) | F16B3 |
| Hit Gene Code | At3g02720 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Class I glutamine amidotransferase-like superfamily protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At2g16365
| Sequence (A. th genome BLAST matches underlined) | >03-K012819-022-159-C01-35St AAATTGTCGTAAGGGATGCCGCACTTTCCCACTATCCTTCGCAAGACCCTTCCTCTATAT AAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCG CCTTCGGTTTAAACTATCAGTGTTCGGGTAAAAATTTAAATATTTGTGAAATGGAGAAAA GTAAAAATTTATCATGACAGACGTCTTCATTTCCCTTAATCTTAATCTTAACATAGTAAA AATCTCTTTCTTCAATTTATCTATATATAAGATTTTACTTTAGTTATGTTTTAAAATAAT AATATACTCTTAATTGGGTTATAAATGTGAAATCTATATATTTTTAAAAGGGAGCAAAAT CAAATCTTATTGTGATAAATATATATTTCTTCATTATATATCCTTAACTTTTAATTCTTC AGTTTTACATACAGATCTTTACGGTGGAATTTAACGATGGCAGATTGGCCCTTACTTCCG AATGACTTACTATGGCATCCTCCCTATAGTGAGGCGACTTACTTTAGAGATTTTCCTCTT CCGTTCCGTCTGCAGCTCATGGCCGGACTGTTGTACCTCCAC |
| GenBank Accession | AL758492 [GenBank] |
| Graphic View |
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| Predicted Position of Insertion | Chr2:7077543 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F16F14 |
| Hit Gene Code | At2g16365 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | F-box family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
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