SimpleSearch - Line and FST details


Line specific information

 
Line ID 159H12
Vector Used pAC161
Line Availability available as T3 set from NASC (N415264)
Segregation Analysis 50:46:25
Confirmed for Hit At3g49990
Parent of DUPLO pair none
Parent of pair(s) 3436, 3437, 3441

Gene hit At3g49990

 
Sequence (A. th genome BLAST matches underlined) 
>96-K012819-022-159-H12-35St
NAATTGNCGTAAGGGATGACGCATAGTCCCACTATCCTTCGCACGACCCTTCCTCTATAT
AAGGAAGTTCATTTCATTTGGAGAGGACAGGGTACCCGGGGATCAGATTGTCGTTTCCCG
CCTTCGGTTTAAACTATCAGTGTTTGACTGGATGTATTGTCTGGATAACCTAGGAGATAC
GAGCGTTCAATATAATCAACCGCGTTTTAGAACGCCGTAATGTGGCCTACCCGTACGCCC
ATTCGTATGGGCCTGCCAACCACAGTATTTGTGTCAGTAGTGCGCGATATTCAGTTCACA
TGCGCTGTTAGCGCAATCCCTAATACCGGCATGGCCGTGCGACGGCGCAGCATTCGATAA
ATCACACGTGACTGGTCTGGGTCTGGATTGTGACCTTGGTTCTGATTCGTTCGCATACAT
CTGCTTTTACACACGCATGCCTAAAGCACGAGTTTATTCCGATTTTATCGTGATCCGACC
TAAGGATTATTGGGATTACGAATCTCTCAATGTTCAGTGGGGGAAAGACCGTATTTTTCG
AAAATTATGAACGCCCTAGGAAGCTCTTCCTCCAATAAGTTGGGACCCTGAAAGGCACAA
GTGGAGCCTTGTGTCAATGGGAAAATCCCAAAACGCATGGGGTTCCCCACCAAGGGGGGC
CCAACTCCCCACGCCGTATGCTGAGTCGCGCCTTTGTCGTGGTCGTTCTATATCGCCCCC
CAAGCGCCCGCAGCAACTATAGCCTCCGCTCCTTATTACATAGCCTGCCCTGTGGTCACG
GGCTCATTGTCGCTACGCCGGGCAGGGTGGGCACTGCGCCTGCGCCCCCCCCCTGCTATT
CTACTTGCTCAGAATCACTCCGCGTTGTTTGTTTTGTTTTCTTCTTTTGTT
GenBank Accession FR804742 [GenBank]
Graphic View Graphic view of gene At3g49990
Predicted Position of Insertion Chr3:18534703 - go to primer design
BLAST e Value 1e-41
Hit Clone Code (BAC ID) F3A4
Hit Gene Code At3g49990 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation casein kinase II, alpha chain 2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences


Last Updated on 10.06.2021 13:37