SimpleSearch - Line and FST details


Line specific information

 
Line ID 160F01
Vector Used pAC161
Line Availability available as T3 set from NASC (N415325)
Segregation Analysis 50:6:5
Confirmed for Hit At5g50360
Parent of DUPLO pair none
Parent of pair(s) none

Gene hit At3g29590

 
Sequence (A. th genome BLAST matches underlined) 
>06-K013216-022-160-F01-8409
NATCGATCCATGTAGATCTTCCTGACATGAANGCCTTTACACTTGAATATATCCTTACTT
ACTTCTCTCCCCAGATATCAACCACCTGCTA
GenBank Accession FR804753 [GenBank]
Graphic View Graphic view of gene At3g29590
Predicted Position of Insertion Chr3:11400366 - go to primer design
BLAST e Value 5e-07
Hit Clone Code (BAC ID) MTO24
Hit Gene Code At3g29590 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation HXXXD-type acyl-transferase family protein
Insertion Classification Promoter
Confirmation Status unknown

Gene hit At5g50360

 
Sequence (A. th genome BLAST matches underlined) 
>06-K013243-022-160-F01-8409
NTTTTGATCCATGTAGACTTTCCCGGACCATGAAGCCTCTAACTACTCTCCCTCCATAAT
CTCTCCGTTACACACTCCACCGTCAACAACGACGACACAACCGTTTCCGTCATTAACTCT
GTCTGATAACGTCTGTTATAACTAGCTCCGTCATTAAAACTCAGCCACAACGCCGCCGCA
CCTAACTCCGGCGCCGCCTTAGCCTTCAACGGCGAGTCTTTCTTCTCAGGAGTCTCTGGA
AGAAGAGGCAACGTCACGATCTCTCTACCACCACCAGATCCGTTCTTCGTCTCATCGTTT
CTCTGTCGTTTGCTGTTACCGTTACTATTAACGGATCCGGTACTGCTACTATTATTCTCC
TTTGAATATTTTCTCCTATGGGATCCTCCTATTAGTGANNNNNNNNNNNNNNNNNTNNCC
NNTNNTNNNTCNATNNAAAANNGTNAATGTGCGAGATCCGTTCTACAGGGACGCTGCCCC
CTCCTTCCTCTCCCTTTTCTCTTCTTCCTTTCTCGGTCGCGCCACCCGCCGACGCGCAGA
CCCGCCGCTCGATCGCCCCTTGTCTATTGCAGTCCCCCTCGTAGCCTCCTCTTTACTGTT
TTTCCCCGCTCACCAAGTCGCCGCAGCTCGTGCGCACTCCCATCCCCACCCCCCTCCCCC
GTCCCGGCTGCCCCGACCCTCTTTCCCCCATTCCTCTCTCTCCTTCCCTCCCCCGTTGCA
GGTTCCCCTTGTGGTCGATCTCTCCTCTGTAGCTGTTGCCTGTAGCGATGTCTCCTGTTA
ACCTCTGTGCCCCGTCATTTTTCGGTCCCTTCTTATTCTTCTTTGTC
GenBank Accession AL758622 [GenBank]
Graphic View Graphic view of gene At5g50360
Predicted Position of Insertion Chr5:20505779 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MXI22
Hit Gene Code At5g50360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation von willebrand factor A domain protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37