SimpleSearch - Line and FST details


Line specific information

 
Line ID 162B10
Vector Used pAC161
Line Availability available as T3 set from NASC (N415478)
Segregation Analysis N/A (line seemingly not resistant, T2 plants grown without drug)
Confirmed for Hit At3g18350
Parent of DUPLO pair 11864
Parent of pair(s) none

Gene hit At3g18350

 
Sequence (A. th genome BLAST matches underlined) 
>74-K013268-022-162-B10-8409
GTGATCCATGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGATGCTT
CCATAATGGAAACCTGGAACTTAATTCTATCTGTGGTGTATTGGGATGATCCTACAAAGT
CTATGGGATCCTCCTNATAGTGAGGGTGAAAAGGATAATTCGTTCGTCCATGCTTTTGTA
CCCGCCAATCTACAGGGTTCCCCTCGGGAGTGCTTGGCATTCCGTGCGATAATGACTTCT
GTTCAACCACCCAAACGTTTTTTTTCCTGACGACGGAGCAGCATTCCAAAAAGATCCCTT
GGCTCGTCTGGGTCGGCTATGGGATCCTCCCTATAGTGANNNNNNNNNNNNN
GenBank Accession FR804776 [GenBank]
Graphic View Graphic view of gene At3g18350
Predicted Position of Insertion Chr3:6299835 - go to primer design
BLAST e Value 1e-28
Hit Clone Code (BAC ID) MYF24
Hit Gene Code At3g18350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation heat-inducible transcription repressor (DUF639)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37