SimpleSearch - Line and FST details


Line specific information

 
Line ID 162C10
Vector Used pAC161
Line Availability available as T3 set from NASC (N415490)
Segregation Analysis 50:38:21
Confirmed for Hit At2g24070
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At3g18350

 
Sequence (A. th genome BLAST matches underlined) 
>75-K013268-022-162-C10-8409
GTGATCCATGTAGATTTCCCGCACATGAAGCACTTTACAATTGAATATATCCTGATGCTT
CCTTAATGGAAACCTGGAACTTAATTCTATCTGTGGTGTATTGGGATGATCCTACAGAAG
TCTATGGGATCCTCCTGATAGTGCCGGCAAACCCCATTATATCCTCCGTTGTGCATGCCC
ATGCATGCCATATTGACTTCTGACAAACCGCTCAGAAGTACGATAGCCTATCTACTGAGT
ATGATAACGAAAAGATCTTTTGTTTTATCCGAGACTCTTCTTGAAATCTACATATAATGA
CATGGCTGACTCCACAAATCCAACCTCTGTATGGGGATATAAGAGCTTTTACAAAATCAG
AACTCGGTACTTGCTCATAAACTTGTTTTCTAG
GenBank Accession AL758765 [GenBank]
Graphic View Graphic view of gene At3g18350
Predicted Position of Insertion Chr3:6299835 - go to primer design
BLAST e Value 5e-22
Hit Clone Code (BAC ID) MYF24
Hit Gene Code At3g18350 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation heat-inducible transcription repressor (DUF639)
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 162B10

Gene hit At2g24070

 
Sequence (A. th genome BLAST matches underlined) 
>75-K013273-022-162-C10-8409
GTGATCCATGGTAGATTTCCCGCACATGAAGCACTTTACAATTGAATATATCCTGTATAA
CCACTAAAAACTTGGTTTAACGTGTGGAACTCTATCATGCACTATAGTACTTGGATTTGT
ATTTTTGATTGGTTACCTCCATGACTGCGGTTGACTGCCAAGAGATTTTCACACTTTGTC
AAGCGAAAAATTCTCTGTTTTAGCTTTAACAGCGAGATCCGAAACAAGTTTGTTCATCTC
CTCCATCTGCGAATGTAAAGACCAGATGGATGATCCCATACTCTGCATTACATCAAGAGC
TGAGGACATAGCTAACTTCAGAGATCCTATGGGATCCTCCTATTAGTG
GenBank Accession AL758766 [GenBank]
Graphic View Graphic view of gene At2g24070
Predicted Position of Insertion Chr2:10231944 - go to primer design
BLAST e Value 5e-102
Hit Clone Code (BAC ID) T29E15
Hit Gene Code At2g24070 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation QWRF motif protein (DUF566)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37