SimpleSearch - Line and FST details


Line specific information

 
Line ID 163D11
Vector Used pAC161
Line Availability available as T3 set from NASC (N415599)
Segregation Analysis 50:49:48
Confirmed for Hit At3g19710
Parent of DUPLO pair none
Parent of pair(s) 4917, 4933, 4939, 4962

Gene hit At5g22765

 
Sequence (A. th genome BLAST matches underlined) 
>84-K013274-022-163-D11-8409
NTGATCCATGTAGAATTTCCCGAACATGAAGCCCTTTACAATTGAATATATCCTGCCATT
AAAGGAATTCAGACACTCCTTATGCAGCAACAAGAACAAAACGAGCTTATCTTCTGCCAT
TGCAATGAGAACATCAAATTATTCTTCATACAAATTTAATTTTACTTCTTCTATCGACAA
CACATATTCTTTGCTTTCATTGAAAACCCCAACATAGCAGCACAGATGGGGCCTATGGGA
TCCTCCTATTAGTG
GenBank Accession AL758886 [GenBank]
Graphic View Graphic view of gene At5g22765
Predicted Position of Insertion Chr5:7577904 - go to primer design
BLAST e Value 1e-96
Hit Clone Code (BAC ID) MDJ22
Hit Gene Code At5g22765 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At3g19710

 
Sequence (A. th genome BLAST matches underlined) 
>84-K013269-022-163-D11-8409
NTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATTCTAATATA
TTCGGTATTAGATGAAACAGAAAAAACTATTAACACATGAATATATAGCTTTCTCAGCTG
ATAGATAAAATGATTGAGCTAATTATCATAAATATAATTACATAGTATACTATTGAGTTA
GCAACTATATTGTATGCATATTTGAGCTATAAACTATTGAAAAAATGAAATAGTTGTACA
TATATGTATTAATGTATATCAACGAACCGAATAGTATGAAAGTATTGATATTCCTATCAA
ATCATTGTATGTGATCTATGGGATCCTC
GenBank Accession AL758885 [GenBank]
Graphic View Graphic view of gene At3g19710
Predicted Position of Insertion Chr3:6849073 - go to primer design
BLAST e Value 3e-131
Hit Clone Code (BAC ID) MMB12
Hit Gene Code At3g19710 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation branched-chain aminotransferase4
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37