SimpleSearch - Line and FST details
Line specific information
Line ID | 165F12 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N415816) |
Segregation Analysis | 50:25:24 |
Confirmed for Hit | At2g40370 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At1g50370
Sequence (A. th genome BLAST matches underlined) | >94-K013365-022-165-F12-8409 GTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATACATGAAAA AAAATTTGTCATTTTTGTTTTGTTTCATCTTTGTTCTGTAAGCAAGACCAATTTTTATCA TCTCAGCTTATTTGCAGTTTAGCACGGTTTGATTAGGTTCTGGGTTAATCTCAGGCTTAT AAAATTCATCAAGCTCAAAAATAGTCCACTACAAGAACATAGAAGACCATTAATCAACAT TCAACAGTAATTTGTTTCTAATCTAATTATTTGGTTTTGTTCAATAATCCTATGGGATCC TCCC |
GenBank Accession | AL759110 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr1:18661914 - go to primer design |
BLAST e Value | 7e-120 |
Hit Clone Code (BAC ID) | F14I3 |
Hit Gene Code | At1g50370 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | Calcineurin-like metallo-phosphoesterase superfamily protein |
Insertion Classification | TS2TE (3') |
Confirmation Status | unknown |
Gene hit At2g40370
Sequence (A. th genome BLAST matches underlined) | >94-K013360-022-165-F12-8409 GTGATCCATGTAGAATTTCCCGTACATGAAGCACTTTACAATTGCTGATTCATGTGAATG CACCCTCTGGGGCCTATAAGAAAAACAGAAAACATCACCGAGTTAACAAATAAAATTGGA AAGGTGATTACGTCTCTTGAATTCTTGGTTAACACGCTTTTTCTATTGACTTTTGATGTA ATATTCCATAATTGCCATAAACATAGTACATATAAATTATACACTAATATAAGATTTTGT TTTGGACCCTCCATTAAATGGATCAATTTAGTATCTGGAGATGTGTACACTGGGTTGCCA ACAAAATTTGAGTACGCAATGTTGCGCGATCTCTATCTAAATAAATATCAAATGCTCATG TAATTGACCTGCATGCACGGATACACAACATGTAAATATTCCCCAAGATTGGACACTATA ATTCTCTAAGATTGGACAGCTTTAATTGACATTTAATACATAAAGGCTTGACATAGGATC GTTTTGATAATGGCTAATCAATAGTTATGCTA |
GenBank Accession | AL759109 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:16860878 - go to primer design |
BLAST e Value | 0.0 |
Hit Clone Code (BAC ID) | T3G21 |
Hit Gene Code | At2g40370 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | laccase 5 |
Insertion Classification | Promoter |
Confirmation Status | confirmed, show confirmation sequences |
Primer and wt-amplicons | show primer details |
Last Updated on 10.06.2021 13:37 |