SimpleSearch - Line and FST details


Line specific information

 
Line ID 167D03
Vector Used pAC161
Line Availability available as T3 set from NASC (N415975)
Segregation Analysis 50:48:36
Confirmed for Hit At4g40050
Parent of DUPLO pair 12412
Parent of pair(s) none

Gene hit At4g40050

 
Sequence (A. th genome BLAST matches underlined) 
>20-K013367-022-167-D03-8409
GTGATCCATGTAGATTCTCCCGGACATGAACGCCTTTACAATTGAATATGGATCAGCATA
GAAGCGTAACTCCTTAAATCGAGCACCAAGATCTTTCCCCTGAGCTTCATCAAAGTAGCT
CCTTTTCAAAATCGCTTCATAGAAAACAAAAGCCTCAAGAAGAAACCTATGGGATCCTCC
CTATAGTGANNNNNNNNTNGNGNAGGAGACAAACTTTAAGGAGTGGAGACTATGGGATCC
TGGCTATGGTGAGACCCGATTTTTTTTTTCGGGGGGGACAGACCGAAAGCCCGGCCAGCA
GGTGGAGGGGGGGGTGTCCCTCCCCCCCTCCCCCAGGTGGGCTTGTGCAACACTGGGCCA
GCCAAGAGGCGGGCTGAAAAAAAAAAAACTTGGCCTGCCGTGTGTCGTTCTCCGCTCTCG
GGCCTGTCGCGTATAGTTCGCTTGGGCGCAGTTAGAGCCGCCTCCTCGGAAACGTTGCCC
GCGTCGGGCCATTTCGTGCGGCGCTCCCGCCTGCGCGGCATGGGGGCCCAATGCGCCCCG
GGCGGTGTTGGGGGGGGGGCGTCGTTGCGTGCCATGGCGTCCCCCTTAGCGGGCGCTATA
TTGCAGCGTGGCCTAGACACCGCCGTATCGTTATTGTTTCTTTTTTCCC
GenBank Accession AL759298 [GenBank]
Graphic View Graphic view of gene At4g40050
Predicted Position of Insertion Chr4:18563345 - go to primer design
BLAST e Value 8e-58
Hit Clone Code (BAC ID) T5J17
Hit Gene Code At4g40050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation signal transducer, putative (DUF3550/UPF0682)
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL759298 [GenBank]


Last Updated on 10.06.2021 13:37