SimpleSearch - Line and FST details


Line specific information

 
Line ID 168B09
Vector Used pAC161
Line Availability available as T3 set from NASC (N416053)
Segregation Analysis 50:32:30
Confirmed for Hit At2g29340
Parent of DUPLO pair none
Parent of pair(s) 72183, 72193, 72206, 72207, 72208, 72210, 72211, 72212, 72213, 72214, 72215, 72216, 72217

Gene hit At2g29340

 
Sequence (A. th genome BLAST matches underlined) 
>66-K013363-022-168-B09-8409
GTGATCCATGGTAGATTTCCCGGACATGAATCACTTTACAATTGAATATATTGGCGTGCT
AACCTATAGGAGCACATGAGCGTTTATTTTAATAATCGGATATTTAAAAGGGCGTGAAAA
GGTTTATTCCGTTCGTCCATTTGTATGTGCTTGCCAACCACAGGGTTCCCCTCGGGAGTG
CTTGGCATTCCGTGCGATAATGACTTCTGTTCAACCACCCAAACGTCGGAAAGCCTGACG
ACGGAGCAGCATTCCAAAAAGATCCCTTGTTTCGTCTGGGTCGGCTATGGGATCCTCCCT
ATAGTGAGAGAGGGGGAAGATTTGAACCCCCCCATGTTTCTGGAATGTTTTANTTATGCC
ATAGTAGAAGAGTTGGCTG
GenBank Accession FR804891 [GenBank]
Graphic View Graphic view of gene At2g29340
Predicted Position of Insertion Chr2:12597282 - go to primer design
BLAST e Value 2e-15
Hit Clone Code (BAC ID) F16P2
Hit Gene Code At2g29340 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation NAD-dependent epimerase/dehydratase family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit F27C12

 
Sequence (A. th genome BLAST matches underlined) 
>66-K013368-022-168-B09-8409
GTGATCCATGTAGATTTCCCGGACATGACTAACTATATCACCCCACATACAAACATACTC
ATTAATTGACCCTTATCTTTTATTTTTATGGTAAGAAAATTGACACTTATCTAATACTCA
CTATGGGATCCTCCCTATAGTGAGAATGCAACCACAGGGGTCCCCTCGGGAGTGCGTTGT
ATTCCGAGCTAACATGACAATTGATCAACCCCCCCAACGTTGGAAAGCCTGACTACAGAG
CACCATTCCAAAGAGACCTCTTTTCTCTGCTGGGCCAACTAACACATACATGTTCCAGAG
AGGGAGTGGGGCCTCATCGCCCCAACGGCCATTCTGATAGGTAATTCATCGTAGAGCTCT
GTTGCCATTCTAACCAAAAACACAAAGGATATTGGAATTATTAATGCCTTCAAACGAGAC
ACCAATCAATAAACATTCAAGAATTTGTAACGTGTAAACGCCGCAGCGCCCGGTGATAGT
ATTCTGCGGGACCTTTTTAACGCCCCTCCCCCGGAATG
GenBank Accession AL759364 [GenBank]
Graphic View Graphic view of sequence AL759364 of line 168B09
Predicted Position of Insertion Chr2:10603727 - go to primer design
BLAST e Value 2e-58
Hit Clone Code (BAC ID) F27C12
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37