SimpleSearch - Line and FST details


Line specific information

 
Line ID 170C01
Vector Used pAC161
Line Availability available as T3 set from NASC (N416249)
Segregation Analysis 50:49:34
Confirmed for Hit At5g04470
Parent of DUPLO pair none
Parent of pair(s) 1068

Gene hit At5g04470

 
Sequence (A. th genome BLAST matches underlined) 
>03-K013467-022-170-C01-8409
NGGGACTTGATTCATGTAGATCTTCCGGCACTGAAGCACTTTACAATTGAATATTATCTT
CGAAGGATCTATGTGCTTCTGTATTACATACATGCCTTTTAGGTAGATATGTGGTTATTT
TTAATACAAGAGAATTAGAAGGGATGATAGAAGTAGATCCGCACCTACTGGTACTTCGCG
CCAGCACCTACGAGAGATCCAACTCCACCACATGCCATGACGTCCGTTACTAGTTCTGAA
AGCCTCCTTACGACCTCTTAAGACTGCGAACACATCTATTTTGATGAAATATCGATGGAT
AGGAAGGGCCTACCTGTCGTATCCAACACTGNAAGAATTTACTGAATTGAGTGAGGAATC
CATAGAGCCTATTGTTCATGTCAGAAAAAAGAAATTGCATCTATGATATATTGGGGTATG
TCTCATTAGCGAACCACCAATCGAAGGCGCGTGCGACCCATGAAGCTAAAAAGGCGGTGG
GACGCTACTAAAGTGGGCGGGTCTTGGTCACGAAGATGATCAATAATTGGGACGTTTCAT
TAAAGGGTTCATAATTTCGAATAGCTTTTTCGATTTTTATCTATCTTTATGTAACGTTTT
CATCAACTTTACACGGTCGACCCACTCTAATAAAATACATCCGCCGAACGATTGACGGAA
TCTTTTTTCCTTTACTAACAATTGCTA
GenBank Accession AL770308 [GenBank]
Graphic View Graphic view of gene At5g04470
Predicted Position of Insertion Chr5:1267353 - go to primer design
BLAST e Value 2e-43
Hit Clone Code (BAC ID) T19N18
Hit Gene Code At5g04470 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37