SimpleSearch - Line and FST details
Line specific information
Line ID | 172F06 |
Vector Used | pAC161 |
Line Availability | available as T3 set from NASC (N416482) |
Segregation Analysis | 50:38:38 |
Confirmed for Hit | At3g45645 |
Parent of DUPLO pair | none |
Parent of pair(s) | none |
Gene hit At2g14070
Sequence (A. th genome BLAST matches underlined) | >46-K013458-022-172-F06-8409 CTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATGATATATAACA GGAACACGAGGCCAACGTACAAGAATTGTTCTATCTGGCTACGGCCTATGGGATCCTCCC TATATGTGAAGAAATGGATAAATAGGCTCGCTACCTATTATATCTTCCCAAATCACCAAT ACATTACACTATGGGATGCTCCCTATAGAGAGACTGTTTACCCCACAAAAAAAGCAAAGA ATAAAGATGTCAAGTTTACTTGTATAAGTGGAAAGAGAGAAAGTCCCATCTCCAAAAAAA ACCCTACGTTAAAACCCANCCACCAAAACCTGGAAATAAAAAAACCATTTTACTCGTGAA ACGCTTTATTCCTAACTTAACTATGGGACCCCCCCTATCCGGAGGCTACATACGTGTCAT GTCTTCTCACGATTCTGCACATCCGCGTAATTATCGCATGGCGGCCCACAAACTGACGCC CAGTTGACATACTGTCTA |
GenBank Accession | AL770564 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr2:5922316 - go to primer design |
BLAST e Value | 3e-14 |
Hit Clone Code (BAC ID) | F9B22 |
Hit Gene Code | At2g14070 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | wound-responsive protein-like protein |
Insertion Classification | CDSi |
Confirmation Status | unknown |
Gene hit At3g45645
Sequence (A. th genome BLAST matches underlined) | >46-K013469-022-172-F06-8409 NTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATTGTCGGGTA AACCTAAGGACAAAAGAGCGTTATATTAGAATAGTCGGATATTTAAAAGGGCGTCGATAA GGTTTATCCGTTCGTCCATTTGTATGTGCATGCCACCACAAGGTTCCCCTAGGGAGAGCT TGGCATTCTGTGCGATAATGACTTCTGTGCAACCACCCAAACGTCAGAAAGCCTGACGAC GGACCAGCATACCAAAAAGATCCCTTGGCTCGTCTGGGTCGGCTATGGGATCCTCCATTA AGTGGAGGAGAAATGAACACCGGCGGTGGCCAATACACGGATTTTCCGGCGGTGGAAACT CACGGAGGACAGTTCATAAGTGACGATATCTTCTGTTAGTTTATTCGAGATCACATCTAA GTATCGTCCTCCGATTATACCAATTGGTCGTGGAGCTTATGGAATCGTTTGGTATGTTTC CTTCTCTGAGCTTTTTCTTAAGTATTATTCTTTGAAATCGGAGTTTTTAATTTCTGGATT TTGATT |
GenBank Accession | AL770565 [GenBank] |
Graphic View | |
Predicted Position of Insertion | Chr3:16756913 - go to primer design |
BLAST e Value | 4e-118 |
Hit Clone Code (BAC ID) | F9K21 |
Hit Gene Code | At3g45645 [Araport] [TAIR] [MIPS] [SIGnAL] |
Gene Annotation | mitogen-activated protein kinase 3 |
Insertion Classification | TS2TE (5') |
Confirmation Status | confirmed, show confirmation sequences |
Last Updated on 10.06.2021 13:37 |