SimpleSearch - Line and FST details
Line specific information
| Line ID | 173G02 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N416586) |
| Segregation Analysis | 50:43:43 |
| Confirmed for Hit | At1g03220 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g03220
| Sequence (A. th genome BLAST matches underlined) | >15-K013459-022-173-G02-8409 TTGATCCATGTAGATTNTCCCGGACATGAAGTCCTTTACAATTGAATATATCCTGCGGGA CATATTATCGCATAAAATTATTAAATAAAATTGTAATGATTTATCAAATAAAATTCACTC GTTACATAATTTATTCAAATCAGTTGATAACAAATGCCAAATAATGATTCCATTGGCTCT TTATTAATCACATCAAACATAATATAATAACCACTAAAAAACAGTTTTAAAAAAAGAAAA CGGATCAACTAATTTAATCAAGCAGTGGAAGTGAAATTGAAGTTGGCGCAGTTAGTTTGA CGGCCCAATAACGTGGAACTAAACCCAAATTTGTTACTCGCCAAATCAAATTCGATCAAA TTATCCTCCAACTGAAACCCTCCAATCACAACAGAGGTTCTTGCGTTGACTCCTCCGTCA ACGAAACCCAAACAGATGACGTCATCACTGACACTCACCATCGAGTTGGCTCCAAATATC CTCCAAACGACGTCTTTGCTATGAAGCACAAGCTCAATCTCCGGCACGGCGTATCCTATG GGATCCTC |
| GenBank Accession | AL770668 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:788643 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F15K9 |
| Hit Gene Code | At1g03220 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Eukaryotic aspartyl protease family protein |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T6B13
| Sequence (A. th genome BLAST matches underlined) | >15-K013470-022-173-G02-8409 TTGATCCATGTAGATTCTCCCTTACATGAAGCACTTTACAATTGAATATTACCTGTGATG CAAAAGGGGTTCTGTCCATAAATATGACATTTCTTTAGCTAATAATTACTTGAATCGGTA ACTAATATAACCTAATAAAGACCTTGTTTGTTTTTTAATCTTGTGGAAGCATATTCTTTA GCAAAATATGACATTTCATTAACTATAAAAATAACTGAATGGGGATGGGGGCGTATCTCA TTTATTTATATAGCCAGATTTATAGACCTACTAATATGGCTGCTATGGGATCCTCCCTTA AGTGAGANNNCNNNNNCCNNNNNCCCCCCCNNCCCCCCGCCCCCTCCCCCGCCCCCCCCC CCCGGCCCCCCNCCAACCCCCGCCCCCCCGCCGCGCCCCCCCGCCCGCCGGGGCCCCGGG CCGCCGGCCGCCCCCGNCGCGGCCGCCCCGCCCCGCCCGCAACAAACAATAAAAACCAAC CCGCGCCCGCCGTACGTCGCCTNCCCACCCCCCCCCTTCCCATCACCTCATTATTTCAAT ACCAACATATCGTTACCAAACCAAGAACCCCGCCCCTACCCCTTCGGCGTCCGCATCCCC CCCGACACAATCATCCGACGTCCCGCATTTCCCTCCCCGCCTCCTCCTCCTTTCCG |
| GenBank Accession | AL770669 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr2:6239236 - go to primer design |
| BLAST e Value | 1e-118 |
| Hit Clone Code (BAC ID) | T6B13 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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