SimpleSearch - Line and FST details
Line specific information
| Line ID | 174H01 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N416693) |
| Segregation Analysis | 50:49:42 |
| Confirmed for Hit | At4g30340 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At4g30340
| Sequence (A. th genome BLAST matches underlined) | >08-K013516-022-174-H01-8409 NTTTGATCCATGTAGATTTCCCTGCACATGAAGCCTTGACGCTGGAGTGAGCCCTGTCAG CGGCGGCGCCTCCAGGAAGTAACAGATGATACGATATCTATCGTTGAATCTTTCCTCTTG ATACAATCTCTCATAGCTATACGAAGATACTCAGGCATCGCTATGGGATCCTCCCTATAG TGAGCGACAGGTATACGATCTTTACCGAGGGTGTGGAGAGCCCTTGATCGGTTGTTGTCC GAGCTTCCTCCACGATTAATCGCCCGGTGGAATATCGGCGATCTTGGCGCTTATCGCCGG TGCTGTCACGGTTCTCTTCATCCCATTTTTCCTGCTTCATTAAGAAGCAGATAGAA |
| GenBank Accession | AL770796 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:14840679 - go to primer design |
| BLAST e Value | 6e-37 |
| Hit Clone Code (BAC ID) | F17I23 |
| Hit Gene Code | At4g30340 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | diacylglycerol kinase 7 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | AL770797 [GenBank] |
Gene hit At4g31550
| Sequence (A. th genome BLAST matches underlined) | >08-K013516-022-174-H01-8409 NTTTGATCCATGTAGATTTCCCTGCACATGAAGCCTTGACGCTGGAGTGAGCCCTGTCAG CGGCGGCGCCTCCAGGAAGTAACAGATGATACGATATCTATCGTTGAATCTTTCCTCTTG ATACAATCTCTCATAGCTATACGAAGATACTCAGGCATCGCTATGGGATCCTCCCTATAG TGAGCGACAGGTATACGATCTTTACCGAGGGTGTGGAGAGCCCTTGATCGGTTGTTGTCC GAGCTTCCTCCACGATTAATCGCCCGGTGGAATATCGGCGATCTTGGCGCTTATCGCCGG TGCTGTCACGGTTCTCTTCATCCCATTTTTCCTGCTTCATTAAGAAGCAGATAGAA |
| GenBank Accession | AL770796 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:15290186 - go to primer design |
| BLAST e Value | 1e-44 |
| Hit Clone Code (BAC ID) | F3L17 |
| Hit Gene Code | At4g31550 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | WRKY DNA-binding protein 11 |
| Insertion Classification | CDSi |
| Confirmation Status | unknown |
Gene hit At5g23410
| Sequence (A. th genome BLAST matches underlined) | >08-K013531-022-174-H01-8409 TTTGATCCATGTAGATTNTCCCGACATGAAGCACTTTACAATTGAATATATACTTTACTT GTACATTCGTAGCTCGCAAACAGAAGCTTATATCAATAATGAGTGATTATGGAATCCCTC CTATAGTGAACTGATGATATGTGAATTGTTACCTCCTCAGACAATGTTGAGGTCGAATAA GAGGAGGATACGAAAAAGATCACAACCTATGGGATCCTCATATAAGTGAATCTTGATTTG GGAGTTTATTTTCTTTTTGACTTCACTATGGGATCCTCCCTATAGTGAG |
| GenBank Accession | AL770797 [GenBank] |
| Graphic View |
|
| Predicted Position of Insertion | Chr5:7886275 - go to primer design |
| BLAST e Value | 5e-25 |
| Hit Clone Code (BAC ID) | T32G24 |
| Hit Gene Code | At5g23410 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | other_RNA |
| Insertion Classification | TS2TE |
| Confirmation Status | unknown |
|
Last Updated on 10.06.2021 13:37 |
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