SimpleSearch - Line and FST details


Line specific information

 
Line ID 176D07
Vector Used pAC161
Line Availability available as T3 set from NASC (N416843)
Segregation Analysis 100:70:51
Confirmed for Hit At1g71680
Parent of DUPLO pair none
Parent of pair(s) 4605, 4670, 4696, 10017, 50302, 88273, 88274

Gene hit At1g71680

 
Sequence (A. th genome BLAST matches underlined) 
>52-K013533-022-176-D07-8409
CTGATCCATTGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATATATCCTGGAAAA
ATAACATAACAATCACCGTCAAATGGATTACAACGATTGGTTACCAGTCACAGCGCCTAT
GGGATCCTCCCTATAGTGA
GenBank Accession BX546570 [GenBank]
Graphic View Graphic view of gene At1g71680
Predicted Position of Insertion Chr1:26944922 - go to primer design
BLAST e Value 1e-19
Hit Clone Code (BAC ID) F26A9
Hit Gene Code At1g71680 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Transmembrane amino acid transporter family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit T7N22

 
Sequence (A. th genome BLAST matches underlined) 
>52-K013518-022-176-D07-8409
TGATCCATGTAGATTTCCCGGACATGAATCCTTTATTCAATTGATTATATTCTGGCATGA
TAACCCTACATGTCACCGCCAAATGGATATACACGATTGGATACCTTTCCAGCTGTCTAT
GGGATCCTCCTCTATGGTGATGAGACTGTAAATCACGATGTAAAATAATAAAATGGCTCT
GTCGAAATTGTAGTTTACTTTAAAAGTGCTGAGTATGAATTGTTCAATACATTCAAGATT
TCTAAGCATATAGTGGCAAATGATGTTAGTGTTTTTTTGTTGTTGCTATGGGATCCTCCC
GenBank Accession AL770982 [GenBank]
Graphic View Graphic view of sequence AL770982 of line 176D07
Predicted Position of Insertion Chr1:20564013 - go to primer design
BLAST e Value 9e-76
Hit Clone Code (BAC ID) T7N22
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37