SimpleSearch - Line and FST details
Line specific information
| Line ID | 179F04 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N417152) |
| Segregation Analysis | 100:70:63 |
| Confirmed for Hit | At4g25220 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 689, 8326, 8362, 9942 |
Gene hit At4g25220
| Sequence (A. th genome BLAST matches underlined) | >30-K013563-022-179-F04-8409 TTGATCCATGGTAGATTTCCCGGACATGAANGCCTTAAACGAGGACATCAATGGGAGGTC TGGATGCTGGTGGTGATGATGATGATGCAGCTACTTCATCTTCTGATCCAACAATAACGC TTTGACTTCTGCTATGATTAGTTTAGTGAGCAACAATCCAGAGATCAATGCTGCAGTCAT CAACATGTAAAACACTGCGTCCCAGCTTATGGCAGAGATGTAACCAGTGAGGACTGGTCC AATCGCAGCACCGACGGATCCTGTGCCGTCTATGATAGCTGAGACTGTAGCCAAAGCCCT TGCATTGCCTTTGAGAGATTTGTGGGTTCCGAGATCAGCTGAGACAGCTGTTGTGATGAG AGCAAATGGTCCAATGATGAAGACTCCTGATGTGAACATGAGGATGACATTGATGGTCAA TGAGATGTGTCCAAAGACTCTGTAGAGGAAAAGAGCTGGGATGGCCAAGTACATGAATCC TGCTGCTGTGATGGCTCTGCCGTTGAGTTGATCAGATATGTATCCGGCTAAGACTCCACC AACAACGCCTTCAACATCGAAGAAAGTCGACAAGTTTCCTGATGTCTCCTCTGACAGGTA CTCTGCTTCGATCACTGCATCACATATAATTCAGACATTGCATATTTAGTCAGGCTACA |
| GenBank Accession | AL771371 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr4:12922760 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F24A6 |
| Hit Gene Code | At4g25220 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | root hair specific 15 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit T6K12
| Sequence (A. th genome BLAST matches underlined) | >30-K013565-022-179-F04-8409 CTGATCCATGGTAGATTTCCCGGACATTGAAGCCTTTACAATCGATGAATTGACCACAGT ATCCCTCTTGTATATACATATAAATGGTCAATGTCTTATAATGTAAGATCTTTCTCACAT ATAAATGGTTAATGCACAATTCTTACAACTTACAAGTTTAGGAACGTTAAAAAAAAAATG GTCCATGTTTTGTCCCCTTTGTTACCAATTACCAGTGTTTTCGAATTTGTTTTAATCCGG CTGGCTTGGGGTTACCAAGGAATTTGGGTTCCGGTTGGGTTTTGGTAAAATAAAAACATT GGTTTTATTTCTGTAGTTGAGGTTCGGTTTGGTTTAATTTGGTTTAACTCTTTATCACTG TTCTTTACCAGGGACCGATTAAAGCACAAAACAGAGTTTGGGGATGGGAAAAAATGGATT TTTTTGTACGTTCTCCAATTTTGTTTTTATGGAATGTGCTGAATGTAAACCCTATTATTC ATCATGTTGGGGAGGGCGAATCGGCGTGATCTTCAGCTTTCTTGCTTGCGGGGTCAAAGG CAGATTCTAGTTCTTTAAACTGCGATTATGATCTTTGCCCAAAATTGGGGAGCCGCGGTT CCTTTGATTGCCGCGCCTCCCGCGG |
| GenBank Accession | AL771372 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:1142977 - go to primer design |
| BLAST e Value | 5e-179 |
| Hit Clone Code (BAC ID) | T6K12 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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