SimpleSearch - Line and FST details
Line specific information
| Line ID | 180H10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N417278) |
| Segregation Analysis | 50:50:50 |
| Confirmed for Hit | At3g48860 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 97309 |
Gene hit At3g48860
| Sequence (A. th genome BLAST matches underlined) | >80-K013611-022-180-H10-8409 NATTGATCCATGTAGATCTTCCGGACATGAANGCCTTTACAATTGAATATAGTCCTGACT AGCACGTGATAGGGATCCTGACCTATACTGAGAAGGAAATATTGAAAGTATGCTTTCAGT TGAGATGGGTTTGAGAGAGCTATGGGATCCTCCCTATAGCGAGCACTGCGTTCGTAGATC GTCTTGAACAACCATCTGGCTTCTGCCTTGCCTGCGGCGCGGCGTGCCAGGCGGTAGAGA AAACGGCCGATGCCGGGATCGATCAAAAAGTAATCGGGGTGAACCGTCAGCACGTCCGGG TTCTTGCCTTCTGTGATCTCGCGGTACATCCAATCAGCTATGGGATCCTCCCTATAGTGA GATTCCCCCTACCTCCCTTTTTATTCACCCGCCCCCTCCCCCTTGTTATCCGCGTGAGCC CCCAACTATCCCCGCTTCGTTGTCAAATTTCCCCCGGCTTCCGGCCCCTCTTCCACCTTA TATTCCCCTTTCCCCGCCTGACGCCAATGCTCGCGCACCCCCGATACCCCGCCGAATTAC TCTATTCCTCCCATCGAACCTTGCCGCCACCCTCGCTCTACCGTCACCCCTTTCCTTACC CCGCCGCCCCCGTATGCCCCCGTAACCCAATCTCCTAATCCATACGGCATCCCGCGCGTC TCCATTTTCGTATCTCCCTATTCCGGCGGACCCCTTCGCCTTCGGGGCCCCTACATTATT CCACTCCGTGACCAGGCGGCCGGCTATCAGTCGTTATGACACGAACATTTTACACCGTAC TACGCTTATATGAGTCGATCAACTAAAAAATTTTTACCTCGGTCTCCATCCCCCGCCCAT GTCCCGACATTTTTATTTGTTTTCCAATAATCCCCCCCTCCTCGCCCCTAATATCCCCCC TGTGCGCCGCTCTCCCCCCGTCATAATTACGACAACACCCAATTTATCCCCGCCCTTTTC ACAATCATCATCATCCCCTATGC |
| GenBank Accession | AL771510 [GenBank] |
| Graphic View | 
|
| Predicted Position of Insertion | Chr3:18120320 - go to primer design |
| BLAST e Value | 2e-21 |
| Hit Clone Code (BAC ID) | T21J18 |
| Hit Gene Code | At3g48860 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | coiled-coil protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
|
Last Updated on 10.06.2021 13:37 |
gabi-kat.de 
