SimpleSearch - Line and FST details
Line specific information
| Line ID | 187B05 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N417873) |
| Segregation Analysis | 50:39:30 |
| Confirmed for Hit | At1g05630 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | 69597, 97612, 97613 |
Gene hit At1g05630
| Sequence (A. th genome BLAST matches underlined) | >85-K112970-0022-187-B05C-8409 ATTTCATTGAATTATCCTGATGAGAATGGCTTCATACATTTACATGTATTCTTCTGTCAC TTGTTGATGATCATTATGAGAGATTTATGTGCGCAGGGATGCTCGGAGTAAAGACCTTCT GAAAGTTTTAAATGTTGACGGGCAAGTTGAGAATCGTGGGGATCTGCCACCTATACAAGA CCAACAAGTTGATGATGAAATGAAACTGAAGTTCTTCTCAGCTTCAAAAAGGGAAAAGCC ACAGGGCTTTCTGCAGCGATCACGTAATGCCATAATGGGAGCGGCAGGAGCTGTTCGCCG AGTCGCCACTAGAAGTGCAGGAGCGTTTTCGGAAGATACTAGGAAAACAGAAGCTATCGT GTTAGCTGTAGATGGAACAATTTGGACTGGAAGCATAAGTGGCCTAATTGTTCAGTGGNA TGGAAA |
| GenBank Accession | HG968809 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:1683693 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F3F20 |
| Hit Gene Code | At1g05630 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | Endonuclease/exonuclease/phosphatase family protein |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
| Other FSTs Supporting this Hit | HG968809 [GenBank] |
Gene hit F6A14
| Sequence (A. th genome BLAST matches underlined) | >34-K014623-022-187-B05-8409 CTGATCCATGTAGATTNTCCCGGACATGAANGCCTTTACAATTGAATATATATTAATTTT AATCCTTTGTGAAAATTCTTACTACTATATATTAATTAGGTCTTTTGGAATATAGACGCG CAACACACATTTTCTTATATATGGATTGAATGGTATCCAAATCCCCAAGGTAATGTAATG TAAAACCAAGATAAAGAAAACGAGTATGACATTGACAATTGAACTTGTAGCGAAGTCAGG ATAGGACGACTTGCGGTTTCTACTTTCTAAGCCAAAGAAACATAGTTTTCATTGATTTTT AGTGTTTTTAAATTTGTTGTTGACTTCCATTAATGGAATATTTCGTACTTTGCTTCTTCT TTTCGAATTTTATTTACCTATATAACTTTGCTTTATTTTCTACAACACAATAAGTATTGC TCATAATTGAGGAAGTCTATACACACAATATTTTCCTATCCTTTCTTTTTTTCTGTCGGG AAATTCTTCATATCCTATGGGGAT |
| GenBank Accession | AL759433 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:6527261 - go to primer design |
| BLAST e Value | 0.0 |
| Hit Clone Code (BAC ID) | F6A14 |
| Insertion Classification | Genome Hit |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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