SimpleSearch - Line and FST details


Line specific information

 
Line ID 187H03
Vector Used pAC161
Line Availability available as T3 set from NASC (N417943)
Segregation Analysis 110:108:102
Confirmed for Hit At1g60810
Parent of DUPLO pair none
Parent of pair(s) 446, 472, 2877, 3164

Gene hit At1g60810

 
Sequence (A. th genome BLAST matches underlined) 
>24-K014619-022-187-H03-8409
TGATCCATGTAGATTTCCCGGCACATGAAGCCTTTACAATTGAATATATCCTGGAAATAC
AAATTGAGGTAGTTATCAATTGAGGGAATCTATGGGATCCTCCCTATAGTGAGAGCACAA
TGACAGGTATATGCAAGGAGGCAATCCAGTACATCACAGCGGCTGCATAAGCCTTTACAA
TCTTATCACTTACTTTCAAAATACTCTTTATCGTCTCTTGAGTATGAGACGTGTTTGGAT
TATGTTTCACTTCTAATGTATCTTACTATTCATAAATAAAGAACAAGTATCTTCTTTTTT
CTTACTTGGTATTTTCTCTTTTGATTCTCATCTTCTTCTTGACTTAGATCAGAAGAAACC
GTATTTAATCAACTTTTATCTATGGGATCCTCC
GenBank Accession BX572212 [GenBank]
Graphic View Graphic view of gene At1g60810
Predicted Position of Insertion Chr1:22388802 - go to primer design
BLAST e Value 3e-88
Hit Clone Code (BAC ID) F8A5
Hit Gene Code At1g60810 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ATP-citrate lyase A-2
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At4g11050

 
Sequence (A. th genome BLAST matches underlined) 
>24-K014623-022-187-H03-8409
NTGATCCATGGTAGATTTCCCGGACATGAANGCCTTTACAATTGAATATATACCTGTTTA
TTTCTTTCTTTCGACTCAATGGGTGGAACGGGCTGTTCGATGACTCAATTTGCGTGAGGG
ACGTTAAGTATGCTGGTGTTCAAACCCTTGTGGCCAAGGTTAATTCATTTACATTTAAGA
GTTTTCTCGGTTTGATGTGGTTTACTTGATTTGGTTTTACTAAAAATGTATAAACCGATA
ATTTTGGTTGGTTAATAGGTTTTGATGCAAGGAAAAGGTGGAGAACATACTGCTGTGTTC
GAGAGGTACCAACAGAAAGCAGAACAGTTAATGTGTTCGTTGTTAGGTAATAAGACAAAG
AACATTAAGAAAACTCCAGGGGGTTTGATTTTACGACTAAGTGGGAATAATATGCAGTTT
GTCACGAGTGCTTCATTCTTAGCCACTGTTTACTCCGACTATCTCTCGTACTCCAAAAGA
GATCTTCTTTGTTCTCAAGGAAACATTTCTCCATCCCAACTCCTA
GenBank Accession AL759506 [GenBank]
Graphic View Graphic view of gene At4g11050
Predicted Position of Insertion Chr4:6749698 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) T22B4
Hit Gene Code At4g11050 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation glycosyl hydrolase 9C3
Insertion Classification CDSi
Confirmation Status unknown


Last Updated on 10.06.2021 13:37