SimpleSearch - Line and FST details


Line specific information

 
Line ID 199B12
Vector Used pAC161
Line Availability available as T3 set from NASC (N419032)
Segregation Analysis 50:2:2
Confirmed for Hit At1g25360
Parent of DUPLO pair none
Parent of pair(s) none
Note

Gene hit At1g25360

 
Sequence (A. th genome BLAST matches underlined) 
>90-K014764-022-199-B12-8409
NTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACAATTGAATATATTGCAGCCAT
TTACATGTAGATACTCATTGCAGTTTGAAAATTTCGAACCGAACCATAAACATGAAATGC
AACCGAATCCAGACCTTGTCCGAGCCATCGCCAACCGCTACGCCGCGAATCTCCGCCTCT
GTTTGCCGCTCCGACGAACATCTCTGCAGCTCGCGCGAGCCGTCCATGGAAATATCATTA
CTTTCGGGTTTCAGCCACGTGCCCATATCCTGAACCGTTTGATTGATGTTTATTGTAAAT
CGTCAGAGCTAAATTATGCACGCCAACTGTTCGATGAAATCTCTGAACCAGATAAAATTG
CTATGGGATC
GenBank Accession AL760545 [GenBank]
Graphic View Graphic view of gene At1g25360
Predicted Position of Insertion Chr1:8894370 - go to primer design
BLAST e Value 7e-160
Hit Clone Code (BAC ID) F4F7
Hit Gene Code At1g25360 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pentatricopeptide repeat (PPR) superfamily protein
Insertion Classification Promoter
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At1g77800

 
Sequence (A. th genome BLAST matches underlined) 
>90-K014765-022-199-B12-8409
TTTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACATTAGACCATCTTCGACCAT
GTTGTTCATCAATTTTCACATGCAGCTTTTTAGCAACATTATAGACTAAATTGTGTGTTA
AGGACCAACTATTATAATACTATAACAGACTTTGTGTGAAATACATGAAGAATCGGGACC
ATGCAATTAAAAATGGATCATCAAAGTACACATATAGTTGATTATCTTGAAACTGCAGTG
CCAAGTAACTGAAGCTGATAATATAGAAGTTCTCCTGTCCAATTCATCTTGAGGAGACAG
ATCCAATATGCCCAATTTCCTATGGGATGCTCCCTTTGNTAGAGTATGGGATCCTC
GenBank Accession FR805611 [GenBank]
Graphic View Graphic view of gene At1g77800
Predicted Position of Insertion Chr1:29257712 - go to primer design
BLAST e Value 2e-92
Hit Clone Code (BAC ID) T32E8
Hit Gene Code At1g77800 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation PHD finger family protein
Insertion Classification CDSi
Confirmation Status failed, line belongs to a contamination group, please check line 199B11


Last Updated on 10.06.2021 13:37