SimpleSearch - Line and FST details


Line specific information

 
Line ID 203G06
Vector Used pAC161
Line Availability available as T3 set from NASC (N419470)
Segregation Analysis 50:6:3
Confirmed for Hit At1g71040
Parent of DUPLO pair 12774
Parent of pair(s) 3408, 9740, 77160, 77166, 77171, 77176, 77177

Gene hit At4g38970

 
Sequence (A. th genome BLAST matches underlined) 
>47-K014507-022-203-G06-8409
NTTTTGGATCCATGTAGATTTCCCGGACATGAACACCTGTACAACTTGAATGTATACTCT
CGATCAGATCTTTAACTATACAGTGGCCATTTGGATTCGAGTAGGGCTAGAGAACACTGA
GGCAAATCGCCAAGCTTTCCGGACTTTGCTGGTTTCTGCACCGGGACTCGGACAGTACGT
CTCCGGCGCAATTCTATTTGAGGAGACTCTGTACCAGTCTACCACCGAAGGCAAGAAAAT
GGTCGACGTCCTCGTCGAGCAGAACATTGTCCCTGGTATCAAAGTCGACAAGGTAACTAA
ACGCATAGACTGTAGAGTATATATACCAACATGCATGGTGCTTAATTTGAGGAATCTTAA
TGAGTTATGTGTATGGAATATTAGGGTTTGGTGCCACTTGTTGGATCCAACAATGAGTCA
TGGTGCCCAGGACTAGATGGTCTATCATCTCGAACTGCTGCTTACTATCAACAGGGTGCC
CCTTTCCCCAATGGAACAGACTAACACTCTCGGTTCTCATTTCATTTCCTACTACCAAAA
AATATGC
GenBank Accession AL760902 [GenBank]
Graphic View Graphic view of gene At4g38970
Predicted Position of Insertion Chr4:18165183 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) F19H22
Hit Gene Code At4g38970 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation fructose-bisphosphate aldolase 2
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g71040

 
Sequence (A. th genome BLAST matches underlined) 
>47-K014506-022-203-G06-8409
GCGGTTTGGGATACTCCCTATTACGGGAGCGTTGTATGGCAGACCGTTGATGTATAGATG
TGTTGGCTCGTCAATGCTTGACACATACTCGAACATAGCAATGTAACGTGTACGTGTGGA
GGTTGATACATGAGCAGGAGGGTATTCAATTAGCTTCTTCGGAATAATCGACGTGTCAAC
TTCTGATTTGTAGTTGATTATAAACTTCATGACTTTGCTGTTCTCTTCCGTGACGGGATC
TCCCGACGGGTAAGGATAAGGTGCATTGTTGGCAAGAATTGCCGCTTTCGATGTTGACTT
TGAAAAGTCAACGAGTACGTGGACGATCTCCGACGGAGCTAGGAGAACATACTTGGCCGA
TACTG
GenBank Accession AL760901 [GenBank]
Graphic View Graphic view of gene At1g71040
Predicted Position of Insertion Chr1:26797700 - go to primer design
BLAST e Value 5e-179
Hit Clone Code (BAC ID) F23N20
Hit Gene Code At1g71040 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Cupredoxin superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37