SimpleSearch - Line and FST details


Line specific information

 
Line ID 205G08
Vector Used pAC161
Line Availability available as T3 set from NASC (N419664)
Segregation Analysis 50:34:34
Confirmed for Hit At1g03060
Parent of DUPLO pair 12762
Parent of pair(s) none

Gene hit At1g03060

 
Sequence (A. th genome BLAST matches underlined) 
>63-K014511-022-205-G08-8409
ATATGATGAAAGCATAAGCAGGCAATCCTTCTGCTGCTCAGAGATTCGATTGAAGATGAC
TCTCTTGAGTCGCTTTTAATATGGTTGCCATGCGCTCCATTACAGTTTTTTCTAGTACTA
AAGAAGGCCTATGGGATCCTCCCTATAGAGAGACAATAAGAAAATCACACTATGGGATCC
TCCCTATAGGGAG
GenBank Accession AL761128 [GenBank]
Graphic View Graphic view of gene At1g03060
Predicted Position of Insertion Chr1:725062 - go to primer design
BLAST e Value 1e-31
Hit Clone Code (BAC ID) F10O3
Hit Gene Code At1g03060 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation BEACH-DOMAIN HOMOLOG A1
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit F14D16

 
Sequence (A. th genome BLAST matches underlined) 
>63-K014510-022-205-G08-8409
TGATCCATGTAGATTTCCCGCACTGAAGCACTTTACAATTGAAATATCCTGATTACCTTT
ATATAAAAACCATATCTTATTTTAGCTATGGGATCCTCCCTATAGTGAGAGGCTCCATTA
CACGTTTTTTCTAGTATAAAGAAGGTCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL761127 [GenBank]
Graphic View Graphic view of sequence AL761127 of line 205G08
Predicted Position of Insertion Chr1:6563332 - go to primer design
BLAST e Value 4e-10
Hit Clone Code (BAC ID) F14D16
Insertion Classification Genome Hit
Confirmation Status unknown


Last Updated on 10.06.2021 13:37