SimpleSearch - Line and FST details


Line specific information

 
Line ID 210E06
Vector Used pAC161
Line Availability available as T3 set from NASC (N420118)
Segregation Analysis 50:47:33
Confirmed for Hit At1g32860
Parent of DUPLO pair none
Parent of pair(s) 4814, 4816, 4889, 10143
Note

Gene hit At1g32860

 
Sequence (A. th genome BLAST matches underlined) 
>45-K014131-022-210-E06-8409
AACACCGGTGACTTATCCCTTCCTCCCCGCTACTACTATTCCCACCACCGGTACCACCAC
CGCTATGGGATCCTCCCTATAGTGAG
GenBank Accession AL766410 [GenBank]
Graphic View Graphic view of gene At1g32860
Predicted Position of Insertion Chr1:11907665 - go to primer design
BLAST e Value 5e-22
Hit Clone Code (BAC ID) F9L11
Hit Gene Code At1g32860 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Glycosyl hydrolase superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details

Gene hit At5g53135

 
Sequence (A. th genome BLAST matches underlined) 
>45-K014135-022-210-E06-8409
TCCCTATAGTGAGCTCATCAGTGTTAGCTCTTTACTTATGCATAATAAATGTTCAGCTCA
TTTCTATCATGATTCATGTTATATTCAGGACCATACTCGGGACTTGACGATTGGTAGAGG
AACTCTCATACATAATCTTTACATTCTGAAGAAAGAAGATACATTGTATTCATCAAATTT
CTGTGGATCCTTGATAGTTGATGATCGTCTATGGCATCATCGCCTATGGGATCCTCCCTA
TAGTGAGAAAGCACAAGGATAAAGTTGGGATGGGTAACGAGAGCCTCCGCATCCGTGCGC
TCTCTATCCGCCCCCGTACCCGCCTCGCCGTCGCCCGCCGCCGCGTCCACCACGGGAGTA
ATCCCTCCCGTAATCGGTCCGGTACCGGGCTATAACCCCGCCCCGCAACGCGGGCGAACC
ACCAGTAAAAACCGGGCAGCAAAGGCATAAGATCGATTTACGGCGCAAAGCACGCCAGTG
TGGCGCGCGTGAGCCGCCCATCCCCAACGCCCACGGCACAACCCCACCCCACGTGCGCCC
TCGCCCCCCCACCCCCACGGCGCAATCCCCCGCCGGCCACAATACACAAACCCCGCCCCC
CCACGCCGATAAAAAAGCGATACGCCCACGGGANCACCCAACGCACCCAGGACCGCCCGC
CCGAGTGGACCCCACATCGCGCCGCCGACCCGCGCACTATAAATACCAACCCCGCTTCGT
TAAGCCGAAGAAGGCGGAAAAAA
GenBank Accession AL766411 [GenBank]
Graphic View Graphic view of gene At5g53135
Predicted Position of Insertion Chr5:21543346 - go to primer design
BLAST e Value 4e-112
Hit Clone Code (BAC ID) MFH8
Hit Gene Code At5g53135 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation  
Insertion Classification TS2TE
Confirmation Status failed, line belongs to a contamination group, please check line 217E06


Last Updated on 10.06.2021 13:37