SimpleSearch - Line and FST details


Line specific information

 
Line ID 214C10
Vector Used pAC161
Line Availability available as T3 set from NASC (N420482)
Segregation Analysis 50:47:47
Confirmed for Hit At1g44940
Parent of DUPLO pair none
Parent of pair(s) 96691, 96694

Gene hit At4g25940

 
Sequence (A. th genome BLAST matches underlined) 
>75-K014139-022-214-C10-8409
TTGATCCATGGTAGATTTCCCGGACATGAAGCACTTTTCCTGTGAGCTTTTCTCGTCAAC
AGTATGTTTATGTATTGCTAGCAACTTGCCGTGTGTTGTGGCACAGTCGCACCGCGGGCT
TTCCTTCTATTTTCGTATGGTGATCCGGCGTATCTAGTGAGTCCCTGTGAAGGAGAAGAA
AAGGTTGAGACTTTGGCCAAAAGAGATATTTGTACACATAAGATGACGTGTAGAAGAAGA
TTCACCAGCAGATCATCAGTGTCTATCAGGAAAGAAGGTTTAGCATCTTCCTCTTCTATT
TTTTCTTGGTCTTCTTCCTCTTCTTCGATAAGCGGCTGGTCTCCTTCGCTGTTTTCCTTT
TGATTATCGGCTTCTGCAGGTTCTTCAGGCTGGACAGAGTGTTCTGCTTCTTCTTCTTCT
TGTTCTTCTTCCTCTTTTTCCTGATACTCCTGTGAAAAACACAACAAAATGTCAATCATA
ATTCATAAGAAGACTGATATTGATGAACAGGACAACATCAACCAAATATGATGAGAGTAA
AACTTTGTACCAGCTTTTTCTGTACAGAACCACTTTGAGGCGCTTCTTTAATGTAGTCTT
CCATTGTTGCTATGGGATCCTC
GenBank Accession AL766867 [GenBank]
Graphic View Graphic view of gene At4g25940
Predicted Position of Insertion Chr4:13170484 - go to primer design
BLAST e Value 2e-92
Hit Clone Code (BAC ID) F14M19
Hit Gene Code At4g25940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation ENTH/ANTH/VHS superfamily protein
Insertion Classification CDSi
Confirmation Status unknown

Gene hit At1g44940

 
Sequence (A. th genome BLAST matches underlined) 
>75-K014143-022-214-C10-8409
GTGATCCATGTAGATTNTCCCGGACATGAAGCACTTATTCCTGTGTGCTTTATGTGTCTA
AAAGTATATTATAAGTATTGCTAACAAAGTACCATGTGTTGTTGCACCATGCACCAGGGC
TTTCCTTCGAATCTACCTAGGGTATCCACCATATAGCGAGTGCACTCAAACCCTTATAAT
ATTATGCAAAACATGTCATGATAAACTACCTATCGTGTATGCTCTCTATATATAGAAGAC
TCCTTTTCTTCAAAG
GenBank Accession AL766868 [GenBank]
Graphic View Graphic view of gene At1g44940
Predicted Position of Insertion Chr1:16994685 - go to primer design
BLAST e Value 1e-16
Hit Clone Code (BAC ID) T12C22
Hit Gene Code At1g44940 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37