SimpleSearch - Line and FST details
Line specific information
| Line ID | 214D10 |
| Vector Used | pAC161 |
| Line Availability | available as T3 set from NASC (N420494) |
| Segregation Analysis | 50:44:36 |
| Confirmed for Hit | At1g70210 |
| Parent of DUPLO pair | none |
| Parent of pair(s) | none |
Gene hit At1g70210
| Sequence (A. th genome BLAST matches underlined) | >76-K014139-022-214-D10-8409 TTGATCCATGTAGATTTCCCGGACATGAAGCACTTTACAATTGAATAACTCACGTTGACG TTTCTATAAACATTTACGCGGAAATCGACGAGCGTAAAGAAACCGATCCATATAGTTAAC GGCGAGGTACGCCGTTAAAGGCTGAAAGTTATAATACGCTTGTACCTGTAAACCAAACAA TACCACACTACTGTAAAAAAAAAGATTCTCTGCATGTAACGATTCAATCAGCGTATTTTA GCGTCTACACACTCTCCGGCGGCGTATTTTAGCATTGAAAAAAATGAGAGGTAGAGAAAA AAAGTGAATAGGCTCGCCTTGAAAATCCATGCGACGGAATCTTCTCTATGGGATCCTCCC TATAAGGGAGGAAGGNACCCTTGNCACCAAATTGCAAATGGGCCGAAATAATGAGGGCTT GAGGA |
| GenBank Accession | AL766879 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr1:26440557 - go to primer design |
| BLAST e Value | 6e-108 |
| Hit Clone Code (BAC ID) | F20P5 |
| Hit Gene Code | At1g70210 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | CYCLIN D1;1 |
| Insertion Classification | CDSi |
| Confirmation Status | confirmed, show confirmation sequences |
| Primer and wt-amplicons | show primer details |
Gene hit At3g57270
| Sequence (A. th genome BLAST matches underlined) | >76-K014143-022-214-D10-8409 NTGATCCATGTAGATTTCCCGGACTGTAATGACTTATACTTTACAGTAATGACTTCATTA AAACAAGACTTTACTGTTAACGTGTTGGTAATTGTAATGCCTTTATAATAACAAGTAAAA TTATACTTCCTGTCTTTAAAACTGAAGTCGTGTGTAATCAGACTCTTAAAATTTATACAA AATTAGTTATCTCAACTTACCTATGGGATCCTCCCTATAGTGAGANNNNNNNNNNNNNNN NNNNNNNNNTNTNNNGNNNNNNNNNNNNANNNCNGANNNNNNNNANANGNNNANAAAAAA NNNNAANANCCNNNNNTAAAAAACCAAAAAAAAAGAATTTTCCATATAAAATTATNATTA TANTAAAAANNNNNANTATTTAATATAAATAAATTATAAAA |
| GenBank Accession | AL766880 [GenBank] |
| Graphic View | 
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| Predicted Position of Insertion | Chr3:21191237 - go to primer design |
| BLAST e Value | 7e-86 |
| Hit Clone Code (BAC ID) | F28O9 |
| Hit Gene Code | At3g57270 [Araport] [TAIR] [MIPS] [SIGnAL] |
| Gene Annotation | beta-1,3-glucanase 1 |
| Insertion Classification | TS2TE (3') |
| Confirmation Status | unknown |
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Last Updated on 10.06.2021 13:37 |
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