SimpleSearch - Line and FST details


Line specific information

 
Line ID 216D01
Vector Used pAC161
Line Availability not available
Segregation Analysis unknown
Parent of DUPLO pair none
Parent of pair(s) 11980
Note

Gene hit At3g41762

 
Sequence (A. th genome BLAST matches underlined) 
>04-K014145-022-216-D01-8409
NCTGGATCCTGTAGATTTCCCGGACTGAAGCCATCACAATGGAATAATGGCAGCTACTCC
ATCGCCTCTATTGCTGTGCTATATCCATATAAGCTCAGACGGGCCAGCGGTGGAGGGAGA
TACTTATAACGCCGTGCGCTCTACACTATGCCGTGCCGCGTAGTCTCTCTGCCTACGACA
TATGGGACGTGCCAACAGACAGCGCAGGCAAAGACGCCAAGGGGTTTCGCGCAGACCTCA
GTGGATCCAAGTCTCCTATGGGAATCGCCGCTCAGAGAGAGATGAGCGAAATGTGAACCC
TCGTCTCGCCTA
GenBank Accession AL767091 [GenBank]
Graphic View Graphic view of gene At3g41762
Predicted Position of Insertion Chr3:14196492 - go to primer design
BLAST e Value 4e-04
Hit Clone Code (BAC ID) F21A14
Hit Gene Code At3g41762 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation hypothetical protein
Insertion Classification TS2TE (5')
Confirmation Status unknown

Gene hit At3g18600

 
Sequence (A. th genome BLAST matches underlined) 
>04-K014141-022-216-D01-8409
NTTTGATCCATGGTAGATTTCCCGGACTGAANGCCTTTACTCATGTCCCAGGCTATGGGA
TCCTCACTATAGTGAGATGTGGAGCGTGCGTGATACGTGCTTATACATAGGTACATATGC
ATGTGCATGCCAACCACAGGGTTCCCGTCGGGAGCGCTAGGCATTCCGAGCGATAATGAC
TTCTGTTCAACCACCCAGACGTAGGAAAGCCTGACGACGGAGCAACATTCCAAAAAGATC
CCTTGGCTCGTCTGGGTCGGCTATGGGATCCTTCCTATAGAGAGACCATGCAGACTGTCT
GTGAAGGATGCTTGAGAACCTCCTACAGGACATTTTAGAGGCAATGAATGAAGATACGAC
AGGGATGACCCGAATGAGAGGCCCTACCAGCGGACACCGATGCTCATACTGTACAAACAC
AAAGCA
GenBank Accession FR805910 [GenBank]
Graphic View Graphic view of gene At3g18600
Predicted Position of Insertion Chr3:6401864 - go to primer design
BLAST e Value 9e-05
Hit Clone Code (BAC ID) K24M9
Hit Gene Code At3g18600 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation P-loop containing nucleoside triphosphate hydrolases superfamily protein
Insertion Classification CDSi
Confirmation Status failed


Last Updated on 10.06.2021 13:37