SimpleSearch - Line and FST details


Line specific information

 
Line ID 219H01
Vector Used pAC161
Line Availability available as T3 set from NASC (N421013)
Segregation Analysis 50:21:17
Confirmed for Hit At5g65380
Parent of DUPLO pair none
Parent of pair(s) 4718, 4788, 4804, 4864, 86170, 86207, 86220, 86260, 86285, 86306, 86320, 86322

Gene hit At5g65380

 
Sequence (A. th genome BLAST matches underlined) 
>08-K014212-022-219-H01-8409
NTTGGATCCATGTAGATCTTCCTTGACTGAAGACCTTTACAGTTGAATGTAGTCCTGTCA
TCGATTACTCTAAGGAGGCTCACATCAAGGGAGTGCGGATGCGGACTACTGATGTTCCCG
CGCAACCACTCTGTATGACAACTAAGGAGCGCACGGCATTATGCGCCTTTCTGAGCTATG
ATCAACCATCGCCTACCCACTACCAACTGACGACTGTACAATATTACTCAACGATGCATT
GGCTCGACCGGGCAGGCTATGCAATCGGGGCTTAGGGCTGTGGGATCCTCCCTTNAGGGA
GAATAATTTTGTGTGTGGGAATATTTAGGAAATCGAAACCTAACATTTGGCACATATATG
GCTATGGGATCCTC
GenBank Accession AL767505 [GenBank]
Graphic View Graphic view of gene At5g65380
Predicted Position of Insertion Chr5:26124566 - go to primer design
BLAST e Value 5e-25
Hit Clone Code (BAC ID) MNA5
Hit Gene Code At5g65380 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation MATE efflux family protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37