SimpleSearch - Line and FST details


Line specific information

 
Line ID 222B03
Vector Used pAC161
Line Availability available as T3 set from NASC (N421231)
Segregation Analysis 50:38:30
Confirmed for Hit At4g01890
Parent of DUPLO pair none
Parent of pair(s) 3601, 3634, 3841

Gene hit At4g01890

 
Sequence (A. th genome BLAST matches underlined) 
>18-K014236-022-222-B03-8409
TTGATCCATGTAGAATTTCCCGGACATGAAGCACTTTACAATTGAATATATTTCTTCATG
AGCTCGAATGTACATTGTGAAAGGCCTAAGTATAAAAAACAGCCCTACAAGATTCACCTC
AAATTACATGGATGTCACGTAATTCACATCAACTCCCTTCGAATCATATCTCCGCCGGAC
TATGGGATCCTCCCTATAGTGAGTTCTGCTTGAACATATAATCATAATATCACATAGCTA
ATATTCTGATCTCAAATANGCATATGACTTATATAAACCACACATTACATTATCAAATCT
TTCACTTTTTAGATTATGATTAATCGGAAAATGTGTACTAGCTATGGCCACCCTCCTTTA
GCAGAGTCTGCACAATAAAGGGACAGATAGCTGGACAATGGAATCCGAAGAGGTTTCCGG
ATATTACCCTTTGTTGAAAAGTCTCAATTGCACTTAGGTCTTACTGAACTGCATCTTCGA
CATTCATGGAGCACACAAGACTCGTCGCGCTCCACCATG
GenBank Accession AL767806 [GenBank]
Graphic View Graphic view of gene At4g01890
Predicted Position of Insertion Chr4:817173 - go to primer design
BLAST e Value 3e-48
Hit Clone Code (BAC ID) T7B11
Hit Gene Code At4g01890 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Pectin lyase-like superfamily protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit AL767807 [GenBank]


Last Updated on 10.06.2021 13:37