SimpleSearch - Line and FST details


Line specific information

 
Line ID 222F02
Vector Used pAC161
Line Availability available as T3 set from NASC (N421278)
Segregation Analysis 50:35:20
Confirmed for Hit At5g35840
Parent of DUPLO pair none
Parent of pair(s) 3903, 3931, 3964, 3990

Gene hit At5g35840

 
Sequence (A. th genome BLAST matches underlined) 
>14-K014240-022-222-F02-8409
TTGATCCATCTATATTTACTGGACATGAACTCATTTACAATTGAATATATCCACCATCTA
TATGTTGTTGTTGTGTGATGCTTTGGTTAAGGAAGTTAGTGAATTAACTGGTTATGATAG
GGTGATGGTGTATAAGTTCCATGAGGATGGGCATGGGGAAGTGATTGCTGAATGCTGCCG
GGAAGATATGGAACCTTATCTTGGGTTGCATTACTCCGCTACTGATATACCGCAAGCTTC
GAGATTTCTGTTTATGAGAAACAAGGTTAGGATGATTTGTGATTGTTCAGCGGTTCCGGT
TAAAGTCGTTCAAGATAAGAGTCTCTCACAGCCAATAAGTCTTTCTGGATCTACTTTGAG
AGCTCCTCATGGTTGTCACGCACAGTATATGAGTAATATGGGATCAGTGGCGTCTCTTGT
CATGTCTGTAACTATCAATGGTAGTGATAGTGATGAGATGAACAGAGATTTACAGACTGG
CAGACACTTATGGGGCTTGGTGGTTTGTCATCACGCAAGTCCTATGGGATC
GenBank Accession AL767865 [GenBank]
Graphic View Graphic view of gene At5g35840
Predicted Position of Insertion Chr5:14008685 - go to primer design
BLAST e Value 0.0
Hit Clone Code (BAC ID) MIK22
Hit Gene Code At5g35840 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation phytochrome C
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details


Last Updated on 10.06.2021 13:37