SimpleSearch - Line and FST details


Line specific information

 
Line ID 225B01
Vector Used pAC161
Line Availability available as T3 set from NASC (N421517)
Segregation Analysis 100:95:64
Confirmed for Hit At5g42140
Parent of DUPLO pair none
Parent of pair(s) 2842, 3324, 83936, 83939, 83943

Gene hit At5g42140

 
Sequence (A. th genome BLAST matches underlined) 
>02-K014239-022-225-B01-8409
NTGATCCATGTAGAATTTCCCGGACATGAANGCCTTTACATTTGAATAATCTCCTGAGCT
GAGGCCACAGAAACATCTTTAACCATTCCATGGACAAGACATCGCTACGGATGCTGTACC
ACCATGTAAATACCTGAGCTTGGGTATGGCATGCTCCATATTGAGAGGACCTTGCGTATA
CTTAGGATACCTGGCGCCAAAGACTATCATGCCGACCACTCTGACGTCTACAAGCCGGAA
CACTGAGCTGCATTCCAATACGATCCCTCGGCTGGTCTGGGTCTGGACTGGTATACAGCC
TATGGAGAGGGACGGATGGCGTCTTCGGGCAAGCAGAGAAGGGACGTGTTTTTTACCTGA
GACAATTCTCATTTTCCACAGGTGCGAGTACCAGAGCTGCCTCCTGCGGTGGATAGAATG
CTGATAGCATGGGATATGACATGGTCACGGACTCAGAGGATGGTGACCCATATGGACCTT
TGGACAATGGCGTATGGGGAACAAGGAGCCTNCTAGACCATGGATATAAAGAGCCTTGGA
CTTAACCAACATGTGTTTCATCTCCAAGTTGACCATACTATTTAAAATATGTGCATGAGG
GACATAGATAAAACAGTTGGATCGACAACATCGGGTAAACGGTAACACAATGGTTAGTAC
AGTATATGG
GenBank Accession FR806079 [GenBank]
Graphic View Graphic view of gene At5g42140
Predicted Position of Insertion Chr5:16840137 - go to primer design
BLAST e Value 2e-05
Hit Clone Code (BAC ID) MJC20
Hit Gene Code At5g42140 [Araport] [TAIR] [MIPS] [SIGnAL]
Gene Annotation Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
Insertion Classification CDSi
Confirmation Status confirmed, show confirmation sequences
Primer and wt-amplicons show primer details
Other FSTs Supporting this Hit FR806079 [GenBank]


Last Updated on 10.06.2021 13:37